RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 UBXN1Q04323 297 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 RALGDSQ12967 914 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 CHAF1BQ13112 559 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 TOMM20Q15388 145 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 TFDP3Q5H9I0 405 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 CXorf57Q6NSI4 855 aaKnown RBP7.51□□□□□ -1.21
GNE-205ENST00000539815 MTFR2Q6P444 385 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 ZNF554Q86TJ5 538 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 OR4D9Q8NGE8 314 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 WDR60Q8WVS4 1066 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 TBATAQ96M53 351 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 SIKE1Q9BRV8 207 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 ERP44Q9BS26 406 aa7.51□□□□□ -1.21
GNE-205ENST00000539815 MBNL1Q9NR56 388 aaKnown RBP7.51□□□□□ -1.21
GNE-205ENST00000539815 B4E171 279 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 MAGEB3O15480 346 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 GREM1O60565 184 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 C1QL1O75973 258 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 HBQ1P09105 142 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 MSH3P20585 1137 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 ELAVL4P26378 380 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 TSPAN7P41732 249 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 TUBA1BP68363 451 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 PITX1P78337 314 aaPredicted RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 SHBQ15464 509 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 VWA3BQ502W6 1294 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 CDCP2Q5VXM1 449 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 TIGD7Q6NT04 549 aaPredicted RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 TUBA1AQ71U36 451 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 STRADAQ7RTN6 431 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 CISD2Q8N5K1 135 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 GOLM1Q8NBJ4 401 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 BRSK1Q8TDC3 778 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 FRS2Q8WU20 508 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 MCEEQ96PE7 176 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 ING2Q9H160 280 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 TAB2Q9NYJ8 693 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 FARSAQ9Y285 508 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 COLEC10Q9Y6Z7 277 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 DOCK9Q9BZ29 2069 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 POLEQ07864 2286 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 VEGFDO43915 354 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 ITIH2P19823 946 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 PFN3P60673 137 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 ASIC2Q16515 512 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 C15orf59Q2T9L4 293 aaPredicted RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 GJB7Q6PEY0 223 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 LURAP1LQ8IV03 231 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 SCUBE1Q8IWY4 988 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 ARFGAP1Q8N6T3 406 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 NKD1Q969G9 470 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 DDA1Q9BW61 102 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 RBM22Q9NW64 420 aaKnown RBP eCLIP7.5□□□□□ -1.21
GNE-205ENST00000539815 COQ3Q9NZJ6 369 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 NOX1Q9Y5S8 564 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 STX7O15400 261 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 PPARGP37231 505 aaPredicted RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 TYRO3Q06418 890 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 RBBP7Q16576 425 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 PTPN20Q4JDL3 420 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 TMEM259Q4ZIN3 620 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 FAM92BQ6ZTR7 304 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 NXPE1Q8N323 547 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 KCTD6Q8NC69 237 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 FAM98AQ8NCA5 519 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 LRRC46Q96FV0 321 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 MAP3K3Q99759 626 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 BOCQ9BWV1 1114 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 XPO4Q9C0E2 1151 aaKnown RBP7.5□□□□□ -1.21
GNE-205ENST00000539815 FOXJ2Q9P0K8 574 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 CRLS1Q9UJA2 301 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 SLC5A6Q9Y289 635 aa7.5□□□□□ -1.21
GNE-205ENST00000539815 KLRC4O43908 158 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 PRMT3O60678 531 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 TMCC2O75069 709 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 OXSR1O95747 527 aaPredicted RBP7.49□□□□□ -1.21
GNE-205ENST00000539815 IDO1P14902 403 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 PNLIPP16233 465 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 CCNFP41002 786 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 PTPN9P43378 593 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 VSNL1P62760 191 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 GBE1Q04446 702 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 RFTN1Q14699 578 aaPredicted RBP7.49□□□□□ -1.21
GNE-205ENST00000539815 STK11Q15831 433 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 ZRANB3Q5FWF4 1079 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 FOXB2Q5VYV0 432 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 NEPROQ6NW34 567 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 GDF7Q7Z4P5 450 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 MAATS1Q7Z4T9 603 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 AOPEPQ8N6M6 819 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 TTC9Q92623 222 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 RBM15Q96T37 977 aaKnown RBP eCLIP7.49□□□□□ -1.21
GNE-205ENST00000539815 ATP13A2Q9NQ11 1180 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 GPATCH2LQ9NWQ4 482 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 IFT80Q9P2H3 777 aaPredicted RBP7.49□□□□□ -1.21
GNE-205ENST00000539815 TRIOO75962 3097 aa7.49□□□□□ -1.21
GNE-205ENST00000539815 GOLGA6L10A0A0M3HER8 536 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms