RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 CLEC9AQ6UXN8 241 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PIK3AP1Q6ZUJ8 805 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 LARP4Q71RC2 724 aaKnown RBP eCLIP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TAS2R42Q7RTR8 314 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 VASH2Q86V25 355 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TMPRSS6Q8IU80 811 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DHX40Q8IX18 779 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TIGD4Q8IY51 512 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TBC1D3Q8IZP1 549 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 D2HGDHQ8N465 521 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 NIPA2Q8N8Q9 360 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DBF4BQ8NFT6 615 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TSPAN14Q8NG11 270 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DNAJB14Q8TBM8 379 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PTPMT1Q8WUK0 201 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 METTL21AQ8WXB1 218 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 RAB40AQ8WXH6 277 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SLAMF9Q96A28 289 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 NRBF2Q96F24 287 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TMEM176AQ96HP8 235 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FAR2Q96K12 515 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 GDAP1L1Q96MZ0 367 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 KLHL32Q96NJ5 620 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 PNKPQ96T60 521 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SEMA3CQ99985 751 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CPPED1Q9BRF8 314 aaPredicted RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CARD6Q9BX69 1037 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 LRRCC1Q9C099 1032 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 CCSER1Q9C0I3 900 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 GPR88Q9GZN0 384 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 POLR1EQ9GZS1 481 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 THAP2Q9H0W7 228 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 GORASP2Q9H8Y8 452 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 KCNK9Q9NPC2 374 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 DNAJC11Q9NVH1 559 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 NCKIPSDQ9NZQ3 722 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 STK26Q9P289 416 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 HSPB7Q9UBY9 170 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 TRMT6Q9UJA5 497 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SLC8A2Q9UPR5 921 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 SSX2IPQ9Y2D8 614 aa3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
AC055720.1-201ENST00000539552 NAIPQ13075 1403 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SMG6Q86US8 1419 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CEP250Q9BV73 2442 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FER1L6Q2WGJ9 1857 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TRBV2A0A0J9YWF9 115 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CCDC195A0A1B0GUA6 201 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 UBE2QL1A1L167 161 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM90A8PA6NJQ4 464 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 E9PBE3 544 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 WNT10BO00744 389 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PPEF2O14830 753 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CASC3O15234 703 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 EIF3DO15371 548 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CTIFO43310 598 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 HOXA3O43365 443 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 USP12O75317 370 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ERLIN1O75477 346 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 RPS6KA4O75676 772 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PRSS23O95084 383 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SCAF4O95104 1147 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM90A13PP0C7W8 464 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM90A24PP0C7X0 464 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SPATA31D3P0C874 917 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CTPS1P17812 591 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CHRM3P20309 590 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SLC6A4P31645 630 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CCR1P32246 355 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 CTNNB1P35222 781 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 THBS4P35443 961 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 HNF1BP35680 557 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 PTGER3P43115 390 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NDUFV1P49821 464 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 DGKEP52429 567 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 VCPP55072 806 aaKnown RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ACY1Q03154 408 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TAP1Q03518 808 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 GFPT1Q06210 699 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FOXL1Q12952 345 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FHL3Q13643 280 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 RAPSNQ13702 412 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 GALNT3Q14435 633 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 EFTUD2Q15029 972 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TAZQ16635 292 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 IGSF11Q5DX21 431 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 HERC4Q5GLZ8 1057 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 FAM91A1Q658Y4 838 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ARHGAP17Q68EM7 881 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 ANKRD40Q6AI12 368 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 METAP1DQ6UB28 335 aaPredicted RBP3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 TMEM108Q6UXF1 575 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 NHLRC1Q6VVB1 395 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 SPATA31D4Q6ZUB0 917 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 C1orf186Q6ZWK4 172 aa3.8□□□□□ -1.8
AC055720.1-201ENST00000539552 GPRIN1Q7Z2K8 1008 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms