RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SMRP1Q8NCR6 262 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 OR14L1PQ8NHC6 308 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ZNRF4Q8WWF5 429 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PGAP3Q96FM1 320 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 EGLN2Q96KS0 407 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HS6ST2Q96MM7 605 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CMTM3Q96MX0 182 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FEM1AQ9BSK4 669 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LRRC1Q9BTT6 524 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HGH1Q9BTY7 390 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 B3GNT4Q9C0J1 378 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SPATC1LQ9H0A9 340 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 THAP2Q9H0W7 228 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ATG10Q9H0Y0 220 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PLK3Q9H4B4 646 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MAP6D1Q9H9H5 199 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KIF9Q9HAQ2 790 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CYP4F11Q9HBI6 524 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 EIF2B3Q9NR50 452 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HIF1ANQ9NWT6 349 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MSRB1Q9NZV6 116 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CRNNQ9UBG3 495 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GTF3C4Q9UKN8 822 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 UTS2RQ9UKP6 389 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 RNF150Q9ULK6 438 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PLAGL1Q9UM63 463 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TRPV2Q9Y5S1 764 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC9B1P1A6NJY1 282 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 VWA5AO00534 786 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MATN3O15232 486 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KCNN4O15554 427 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TMCC1O94876 653 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MFN2O95140 757 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PLAUP00749 431 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GH2P01242 217 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 IGHV4-30-4P0DP06 118 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GP9P14770 177 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TNFRSF1AP19438 455 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HLA-DPA1P20036 260 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ANXA7P20073 488 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KELP23276 732 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ITGA3P26006 1051 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GHRHRQ02643 423 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PPP2R5CQ13362 524 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TUBB2AQ13885 445 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MEF2DQ14814 521 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ESCO2Q56NI9 601 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ZRANB3Q5FWF4 1079 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ENTPD8Q5MY95 495 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CYP4A22Q5TCH4 519 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FAM69BQ5VUD6 431 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 BRAT1Q6PJG6 821 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DCLRE1AQ6PJP8 1040 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TMCO3Q6UWJ1 677 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 OLFML1Q6UWY5 402 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 Q75L30 129 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MTSS1LQ765P7 747 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLFN11Q7Z7L1 901 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KLBQ86Z14 1044 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FAM219AQ8IW50 185 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 THNSL1Q8IYQ7 743 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PRSS35Q8N3Z0 413 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HDDC3Q8N4P3 179 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC25A41Q8N5S1 370 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 RTL3Q8N8U3 475 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 POGLUT1Q8NBL1 392 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DENND6BQ8NEG7 585 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 OR6J1Q8NGC5 347 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MAP4K1Q92918 833 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GTF3C6Q969F1 213 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CENPTQ96BT3 561 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ABHD8Q96I13 439 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 C17orf77Q96MU5 243 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GCNAQ96QF7 691 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 INTS14Q96SY0 518 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PSMB7Q99436 277 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SEPHS2Q99611 448 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TUBB2BQ9BVA1 445 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 NUP85Q9BW27 656 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 QTRT1Q9BXR0 403 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GPR88Q9GZN0 384 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC28A3Q9HAS3 691 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 VEZTQ9HBM0 779 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MOV10Q9HCE1 1003 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC177Q9NQR7 707 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 POLE3Q9NRF9 147 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GPR173Q9NS66 373 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ABCF3Q9NUQ8 709 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PRMT7Q9NVM4 692 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TUBA8Q9NY65 449 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CHORDC1Q9UHD1 332 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DLGAP4Q9Y2H0 992 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CLIC4Q9Y696 253 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ZFP37Q9Y6Q3 630 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 NHSL1Q5SYE7 1610 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ATAD2BQ9ULI0 1458 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 C2CD4BA6NLJ0 364 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 BECN2A8MW95 431 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MAGEB17A8MXT2 336 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF814B7Z6K7 855 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms