RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CHRAC1Q9NRG0 131 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 CPNE7Q9UBL6 633 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 RNF14Q9UBS8 474 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 SOX13Q9UN79 622 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 SLC30A1Q9Y6M5 507 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 ANKRD12Q6UB98 2062 aa13.46□□□□□ -0.26
CD9-208ENST00000538834 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TP73O15350 636 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 AP2A2O94973 939 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 CPNE6O95741 557 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 MSH3P20585 1137 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 IDSP22304 550 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 CSF2RBP32927 897 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 GPLD1P80108 840 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 BASP1P80723 227 aaKnown RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 HHEXQ03014 270 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 CYP4F3Q08477 520 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 NFE2L1Q14494 772 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 SEMA3AQ14563 771 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 INSCQ1MX18 579 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 RNASEH2BQ5TBB1 312 aaKnown RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 SLC9B2Q86UD5 537 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 BEND7Q8N7W2 519 aaPredicted RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 MDM1Q8TC05 714 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 NXPE2Q96DL1 559 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 ATXN7L3BQ96GX2 97 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TTC25Q96NG3 672 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TWSG1Q9GZX9 223 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 DDX47Q9H0S4 455 aaKnown RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
CD9-208ENST00000538834 POLR1BQ9H9Y6 1135 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 SLC40A1Q9NP59 571 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 OGFRQ9NZT2 677 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 CRLS1Q9UJA2 301 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 ZMIZ1Q9ULJ6 1067 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
CD9-208ENST00000538834 TRBV23OR9-2A0A075B6M9 112 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 RHPN2P1A8MT19 583 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 TMX2-CTNND1H3BSU7 103 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 GSTM1P09488 218 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 HOXB3P14651 431 aaPredicted RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 NMBRP28336 390 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 LIMK2P53671 638 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 CRADDP78560 199 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 GSTM4Q03013 218 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 PTK6Q13882 451 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SEPT6Q14141 434 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 PLA2G4EQ3MJ16 856 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 FNBP1LQ5T0N5 605 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 AFTPHQ6ULP2 937 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 CERS6Q6ZMG9 384 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 TMEM26Q6ZUK4 368 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 OR4D9Q8NGE8 314 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 OR4L1Q8NH43 312 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SH3KBP1Q96B97 665 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SIGLEC10Q96LC7 697 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 TMEM74Q96NL1 305 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SLC46A1Q96NT5 459 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 NUDT22Q9BRQ3 303 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SYBUQ9NX95 663 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 BFARQ9NZS9 450 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 SEMA5BQ9P283 1151 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 ACSL5Q9ULC5 683 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 ATXN7L1Q9ULK2 861 aaPredicted RBP13.44□□□□□ -0.26
CD9-208ENST00000538834 PRSS21Q9Y6M0 314 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 HEATR5BQ9P2D3 2071 aa13.44□□□□□ -0.26
CD9-208ENST00000538834 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 PRAMEF33A0A0G2JMD5 474 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 IGHV5-10-1A0A0J9YXX1 117 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 PMS2P1A4D2B8 440 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 LOC400499M0QZD8 3231 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 TLX3O43711 291 aaPredicted RBP13.43□□□□□ -0.26
CD9-208ENST00000538834 AVILO75366 819 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 GAS8O95995 478 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 C9P02748 559 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 THRAP10827 490 aa13.43□□□□□ -0.26
CD9-208ENST00000538834 RALBP11234 206 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms