RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 BOCQ9BWV1 1114 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 ARRDC1-AS1Q9H2J1 176 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 FGF22Q9HCT0 170 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 PNMA8BQ9ULN7 279 aaPredicted RBP16.99■□□□□ 0.31
CLN6-202ENST00000538696 TMEM98Q9Y2Y6 226 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 GPR179Q6PRD1 2367 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 IGLV3-16A0A075B6K0 115 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 SPTY2D1-AS1A0A0U1RR47 76 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 TM9SF1O15321 606 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 MPOP05164 745 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 C2P06681 752 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 CEACAM5P06731 702 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 AKT1P31749 480 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 CRHR1P34998 444 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 POLD2P49005 469 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 TAS2R39P59534 338 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 IRF9Q00978 393 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 FZD2Q14332 565 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 ITIH4Q14624 930 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 TEAD4Q15561 434 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 DUOXA1Q1HG43 343 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 HHATQ5VTY9 493 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 LYPLAL1Q5VWZ2 237 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 ENPP7Q6UWV6 458 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 CERS6Q6ZMG9 384 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 RABEPKQ7Z6M1 372 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 SDCCAG8Q86SQ7 713 aaPredicted RBP16.98■□□□□ 0.31
CLN6-202ENST00000538696 TAX1BP1Q86VP1 789 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 DCP2Q8IU60 420 aaKnown RBP16.98■□□□□ 0.31
CLN6-202ENST00000538696 NAT14Q8WUY8 206 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 DYDC1Q8WWB3 177 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 PDXPQ96GD0 296 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 FAM111AQ96PZ2 611 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 COPS8Q99627 209 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 OLFM1Q99784 485 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 PAIP2Q9BPZ3 127 aaKnown RBP16.98■□□□□ 0.31
CLN6-202ENST00000538696 OR2AG1Q9H205 316 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 TRIM39Q9HCM9 518 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 ATXN10Q9UBB4 475 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 GRID1Q9ULK0 1009 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 SLC17A4Q9Y2C5 497 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 USP34Q70CQ2 3546 aa16.98■□□□□ 0.31
CLN6-202ENST00000538696 A0A096LPK6 155 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 OR1I1O60431 355 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 GLRA3O75311 464 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ZNF8P17098 575 aaPredicted RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 MSH3P20585 1137 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 KELP23276 732 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 HTR1BP28222 390 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 PMLP29590 882 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ETV4P43268 484 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 TTPAP49638 278 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 C21orf59P57076 290 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 EIF2B5Q13144 721 aaKnown RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ZNF460Q14592 562 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ZKSCAN8Q15776 578 aaPredicted RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 CCDC6Q16204 474 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 TUBB8Q3ZCM7 444 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 PLA2G2CQ5R387 149 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 HECTD2Q5U5R9 776 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ZNF549Q6P9A3 640 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CLEC14AQ86T13 490 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CEP97Q8IW35 865 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 RASGEF1AQ8N9B8 481 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 OR56A4Q8NGH8 313 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CEP76Q8TAP6 659 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CKAP2Q8WWK9 683 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 OR1E3Q8WZA6 343 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 LPGAT1Q92604 370 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 IQCGQ9H095 443 aaKnown RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 SMOC1Q9H4F8 434 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CAAP1Q9H8G2 361 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CAPN10Q9HC96 672 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 MRPL40Q9NQ50 206 aaKnown RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 FSCN3Q9NQT6 498 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 INTS10Q9NVR2 710 aaKnown RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 KLQ9UEF7 1012 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 ANKRD6Q9Y2G4 727 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 CRYL1Q9Y2S2 319 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 PLLPQ9Y342 182 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 PCYT1BQ9Y5K3 369 aaPredicted RBP16.97■□□□□ 0.31
CLN6-202ENST00000538696 KNL1Q8NG31 2342 aa16.97■□□□□ 0.31
CLN6-202ENST00000538696 VEGFDO43915 354 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 MAGEC1O60732 1142 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 DNAJC6O75061 913 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 NDUFS3O75489 264 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 FUCA1P04066 466 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 CFIP05156 583 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 RETP07949 1114 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 DHRS4L1P0CG22 281 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 CTSKP43235 329 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 RAB10P61026 200 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 POU4F1Q01851 419 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 TMEM115Q12893 351 aaPredicted RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
CLN6-202ENST00000538696 ALG11Q2TAA5 492 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 KIF19Q2TAC6 998 aa16.96■□□□□ 0.31
CLN6-202ENST00000538696 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms