RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GALNT7Q86SF2 657 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TBCBQ99426 244 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MAT2BQ9NZL9 334 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 KLK14Q9P0G3 267 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MARK1Q9P0L2 795 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MTHFD1P11586 935 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF720Q7Z2F6 126 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 IRF2BP2Q7Z5L9 587 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TFAP2DQ7Z6R9 452 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 BANPQ8N9N5 519 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZFP28Q8NHY6 868 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 EDEM1Q92611 657 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SNX27Q96L92 541 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TEFMQ96QE5 360 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 BARD1Q99728 777 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SAMD4AQ9UPU9 718 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SALL1Q9NSC2 1324 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ICMTO60725 284 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 BCAS2O75934 225 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 OR2B3O76000 313 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 C8BP07358 591 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RPL4P36578 427 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ARL4DP49703 201 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 DPY19L2Q6NUT2 758 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PLEKHG7Q6ZR37 379 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RFKQ969G6 155 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TCF25Q9BQ70 676 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MKRN2Q9H000 416 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 AMBNQ9NP70 447 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ACP6Q9NPH0 428 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MGAT4AQ9UM21 535 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HIF3AQ9Y2N7 669 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HIVEP3Q5T1R4 2406 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 F5H5T6 163 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CXCR6O00574 342 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SERPINB7O75635 380 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CDRT1O95170 752 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SNAP29O95721 258 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 AMHP03971 560 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CSN2P05814 226 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CPB1P15086 417 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HNRNPH3P31942 346 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF135P52742 658 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ERVK-25P63136 954 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 BOP1Q14137 746 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TBC1D25Q3MII6 688 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 BRMS1LQ5PSV4 323 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SCUBE3Q8IX30 993 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 VWDEQ8N2E2 1590 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 KAT2AQ92830 837 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RHOJQ9H4E5 214 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TLR8Q9NR97 1041 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SUCOQ9UBS9 1254 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TESMINQ9Y4I5 508 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SLC28A1O00337 649 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NUAK1O60285 661 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 XYLBO75191 536 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ALDH1A2O94788 518 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PAPSS2O95340 614 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CLIC3O95833 236 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TRBC1P01850 177 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SOX10P56693 466 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 S100A10P60903 97 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HNRNPA0Q13151 305 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ARL13AQ5H913 290 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM198Q66K66 360 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 EIF5AL1Q6IS14 154 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 FAM171BQ6P995 826 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CCBE1Q6UXH8 406 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 OR5K1Q8NHB7 308 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CFAP97Q9P2B7 532 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MAN2B2Q9Y2E5 1009 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CPSF4LA6NMK7 179 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PRRG1O14668 218 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PER2O15055 1255 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SCELO95171 688 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NUDT7P0C024 238 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF35P13682 527 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SLC12A3P55017 1021 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 GPSM2P81274 684 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 GNA13Q14344 377 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SUSD4Q5VX71 490 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SV2AQ7L0J3 742 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 IFNL1Q8IU54 200 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 GLIS3Q8NEA6 775 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TSEN15Q8WW01 171 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RPRD1AQ96P16 312 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SLA2Q9H6Q3 261 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 FAM86C2PA6NEL3 165 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ANXA2P2A6NMY6 339 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TADA2AO75478 443 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CABYRO75952 493 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ANXA2P07355 339 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CHRNB1P11230 501 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PPIBP23284 216 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RENBPP51606 427 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MPP1Q00013 466 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PCDH1Q08174 1060 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms