RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 RNF214Q8ND24 703 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 DDHD1Q8NEL9 900 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 DTX3LQ8TDB6 740 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 RNF31Q96EP0 1072 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 OXNAD1Q96HP4 312 aaPredicted RBP9.5□□□□□ -0.89
CHD4-207ENST00000537634 RBM41Q96IZ5 413 aaKnown RBP9.5□□□□□ -0.89
CHD4-207ENST00000537634 ELMO2Q96JJ3 720 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 QKIQ96PU8 341 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD4-207ENST00000537634 FCRL5Q96RD9 977 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 GOLPH3Q9H4A6 298 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 IL17CQ9P0M4 197 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 EPHA6Q9UF33 1036 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 RSPH14Q9UHP6 348 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 CROTQ9UKG9 612 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD4-207ENST00000537634 ALG6Q9Y672 507 aa9.5□□□□□ -0.89
CHD4-207ENST00000537634 hCG_1818297A0A087WSY0 165 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 OR2AG2A6NM03 316 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 HACD1B0YJ81 288 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 STX7O15400 261 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 BUD23O43709 281 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A9O60656 530 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 POP7O75817 140 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 FGF5P12034 268 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 ZNF28P17035 718 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 NELFEP18615 380 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A6P19224 532 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A1P22309 533 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A4P22310 534 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 FECHP22830 423 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 PBLDP30039 288 aaPredicted RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 MAGEA1P43355 309 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 CTSCP53634 463 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 HADHBP55084 474 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 ADCY2Q08462 1091 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 LONRF2Q1L5Z9 754 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 SKIDA1Q1XH10 827 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 GPRC6AQ5T6X5 926 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 ATP1A1-AS1Q5TC04 95 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 TMEM220Q6QAJ8 160 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 PPP1R3BQ86XI6 285 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 RCOR2Q8IZ40 523 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 GPR150Q8NGU9 434 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 KLHL6Q8WZ60 621 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UBXN4Q92575 508 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 ZNF514Q96K75 400 aaPredicted RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 FERMT1Q9BQL6 677 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 RAB33BQ9H082 229 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 EPN3Q9H201 632 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A7Q9HAW7 530 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A10Q9HAW8 530 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 UGT1A8Q9HAW9 530 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 PDE7BQ9NP56 450 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 ZNF71Q9NQZ8 489 aaPredicted RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 IMP3Q9NV31 184 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 SMOXQ9NWM0 555 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 ANAPC2Q9UJX6 822 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 KCND3Q9UK17 655 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 TRHDEQ9UKU6 1024 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 PSMD13Q9UNM6 376 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 KCTD3Q9Y597 815 aa9.49□□□□□ -0.89
CHD4-207ENST00000537634 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 DNMT3AQ9Y6K1 912 aaPredicted RBP9.49□□□□□ -0.89
CHD4-207ENST00000537634 MACROD2A1Z1Q3 448 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 H7C0C1 242 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 APOC4-APOC2K7ER74 178 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 KATNA1O75449 491 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 SPAG6O75602 509 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 ANXA9O76027 345 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 APOC2P02655 101 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 MT-ND3P03897 115 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 CCNYL3P0C7X3 344 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 MTHFD1P11586 935 aaKnown RBP9.48□□□□□ -0.89
CHD4-207ENST00000537634 MSH3P20585 1137 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 F8A1P23610 371 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 CASRP41180 1078 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 ATP5OP48047 213 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 MARCKSL1P49006 195 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 ARL4DP49703 201 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 GEMP55040 296 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 PPP1CAP62136 330 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 XRCC4Q13426 336 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 TUBB3Q13509 450 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 NFE2L1Q14494 772 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 SPA17Q15506 151 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 RPE65Q16518 533 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHD4-207ENST00000537634 LACTB2Q53H82 288 aaPredicted RBP9.48□□□□□ -0.89
CHD4-207ENST00000537634 DNTTIP2Q5QJE6 756 aaKnown RBP9.48□□□□□ -0.89
CHD4-207ENST00000537634 FNBP1LQ5T0N5 605 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 ITPRIPL1Q6GPH6 555 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 C11orf63Q6NUN7 778 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 FAM83HQ6ZRV2 1179 aaPredicted RBP9.48□□□□□ -0.89
CHD4-207ENST00000537634 BBS12Q6ZW61 710 aa9.48□□□□□ -0.89
CHD4-207ENST00000537634 DET1Q7L5Y6 550 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms