RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ATP13A3Q9H7F0 1226 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NANOGQ9H9S0 305 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PAQR5Q9NXK6 330 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SNTG2Q9NY99 539 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SPASTQ9UBP0 616 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PRKAB1Q9Y478 270 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NCAM2O15394 837 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SLC22A3O75751 556 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CNTN5O94779 1100 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CHRNA1P02708 482 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PGRP06401 933 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 OPRL1P41146 370 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MAD2L1Q13257 205 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 KYAT1Q16773 422 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 DEFB115Q30KQ5 88 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GALNT13Q8IUC8 556 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PEX13Q92968 403 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SORT1Q99523 831 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 BEX2Q9BXY8 128 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ADGRE2Q9UHX3 823 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PIN4Q9Y237 131 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PRAMEF33A0A0G2JMD5 474 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TK2O00142 265 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PRAMEF10O60809 474 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ARHGEF15O94989 841 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DNAJB13P59910 316 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ESCO2Q56NI9 601 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PCID2Q5JVF3 399 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SPOUT1Q5T280 376 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DEFB106AQ8N104 65 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RPL3LQ92901 407 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MED28Q9H204 178 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SLC6A15Q9H2J7 730 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ACTR8Q9H981 624 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CLN6Q9NWW5 311 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 C7orf72A4D263 438 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TUBAL3A6NHL2 446 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 HMX3A6NHT5 357 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 IFNA14P01570 189 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 STAG3L1P0CL83 205 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CPB1P15086 417 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CD36P16671 472 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 S100A3P33764 101 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RFC2P35250 354 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SEMA5AQ13591 1074 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 LRIT3Q3SXY7 679 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CERCAMQ5T4B2 595 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF621Q6ZSS3 439 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DENND6AQ8IWF6 608 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DNAJB8Q8NHS0 232 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DTLQ9NZJ0 730 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PCDH10Q9P2E7 1040 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MYH9P35579 1960 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 WTIPA6NIX2 430 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ARPC2O15144 300 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RPLP0P05388 317 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CTRB1P17538 263 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DAG1Q14118 895 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF460Q14592 562 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MEP1AQ16819 746 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SYT16Q17RD7 645 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 STRIP1Q5VSL9 837 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CTRB2Q6GPI1 263 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZDHHC17Q8IUH5 632 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 FAM9CQ8IZT9 166 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MUL1Q969V5 352 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 WDR18Q9BV38 432 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ATP13A2Q9NQ11 1180 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DDX4Q9NQI0 724 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF639Q9UID6 485 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 COL14A1Q05707 1796 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM233B4DJY2 109 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PSKH1P11801 424 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MAGEA3P43357 314 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ARHGEF7Q14155 803 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TOR1AIP1Q5JTV8 583 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF517Q6ZMY9 492 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ACER1Q8TDN7 264 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SYTL5Q8TDW5 730 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PIH1D2Q8WWB5 315 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 KLHL6Q8WZ60 621 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 EMID1Q96A84 441 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 GMCL1Q96IK5 515 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MAELQ96JY0 434 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 C8orf48Q96LL4 319 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PPM1MQ96MI6 270 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DSN1Q9H410 356 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 DUS2Q9NX74 493 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TJP2Q9UDY2 1190 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SSR3Q9UNL2 185 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CSNK1G3Q9Y6M4 447 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 AP1M2Q9Y6Q5 423 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 FAM92AA1XBS5 289 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 FFAR3O14843 346 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 GPR42O15529 346 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SH3BGRLO75368 114 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 IL1R1P14778 569 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms