RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FCRL5Q96RD9 977 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 VAT1Q99536 393 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 EPN3Q9H201 632 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IL17CQ9P0M4 197 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CROTQ9UKG9 612 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KCTD3Q9Y597 815 aa19.3■□□□□ 0.68
TNFRSF1B-204ENST00000536782 USP9YO00507 2555 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GLYATL1P3A0A0U1RQE8 302 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A9O60656 530 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 POP7O75817 140 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 NELFEP18615 380 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A6P19224 532 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A1P22309 533 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A4P22310 534 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CASRP41180 1078 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CHRNA4P43681 627 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DMPKQ09013 629 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ITGA9Q13797 1035 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SLC1A5Q15758 541 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CHRNA6Q15825 494 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TFDP3Q5H9I0 405 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 FAM151BQ6UXP7 276 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PPP1R3BQ86XI6 285 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ZNF567Q8N184 647 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RASGEF1AQ8N9B8 481 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 BLOC1S5Q8TDH9 187 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A7Q9HAW7 530 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A10Q9HAW8 530 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UGT1A8Q9HAW9 530 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LNPEPQ9UIQ6 1025 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PKP3Q9Y446 797 aa19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DNMT3AQ9Y6K1 912 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPENQ96T58 3664 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GOLGA6L3A6NEY3 463 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 F5H423 210 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPAG6O75602 509 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CCNYL3P0C7X3 344 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 HLA-DPA1P20036 260 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 FECHP22830 423 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CTSCP53634 463 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ADCY2Q08462 1091 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MPP3Q13368 585 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KLHL35Q6PF15 583 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TMEM220Q6QAJ8 160 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CNGA4Q8IV77 575 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 DDHD1Q8NEL9 900 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 IPMKQ8NFU5 416 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UBXN4Q92575 508 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 OXNAD1Q96HP4 312 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PDE7BQ9NP56 450 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KCND3Q9UK17 655 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PSMD13Q9UNM6 376 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ALG6Q9Y672 507 aa19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SPTAN1Q13813 2472 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1B-204ENST00000536782 OR2AG2A6NM03 316 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GPR39O43194 453 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 BUD23O43709 281 aaKnown RBP19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KATNA1O75449 491 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 MT-ND3P03897 115 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 ERV3-1Q14264 604 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RPE65Q16518 533 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 LACTB2Q53H82 288 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GPRC6AQ5T6X5 926 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 CCDC50Q8IVM0 306 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 RCOR2Q8IZ40 523 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SIDT2Q8NBJ9 832 aaKnown RBP19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 GPR150Q8NGU9 434 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 HAUS1Q96CS2 278 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 FSD1LQ9BXM9 530 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TSPY26PQ9H489 355 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 SEMA5BQ9P283 1151 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 TRHDEQ9UKU6 1024 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 PADI1Q9ULC6 663 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 KCNMB2Q9Y691 235 aa19.27■□□□□ 0.68
TNFRSF1B-204ENST00000536782 UTP20O75691 2785 aaKnown RBP19.27■□□□□ 0.67
TNFRSF1B-204ENST00000536782 hCG_1818297A0A087WSY0 165 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 HACD1B0YJ81 288 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 ZRANB2O95218 330 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 HADHBP55084 474 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PPP1CAP62136 330 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 TUBB3Q13509 450 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 NFE2L1Q14494 772 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 PLCL1Q15111 1095 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FAM83HQ6ZRV2 1179 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 KATNAL2Q8IYT4 538 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 SLC41A2Q96JW4 573 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 QKIQ96PU8 341 aaKnown RBP eCLIP19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RSPH14Q9UHP6 348 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 RARRES3Q9UL19 164 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 POLHQ9Y253 713 aa19.26■□□□□ 0.67
TNFRSF1B-204ENST00000536782 IGHV5-51A0A0C4DH38 117 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 AKR1B15C9JRZ8 316 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 GAPDHSO14556 408 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 STX7O15400 261 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MSH3P20585 1137 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 AKT1P31749 480 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 CA5AP35218 305 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 MAGEA1P43355 309 aa19.25■□□□□ 0.67
TNFRSF1B-204ENST00000536782 FOXK1P85037 733 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms