RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SPARCL1Q14515 664 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 FNBP1LQ5T0N5 605 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 AGAP9Q5VTM2 703 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 RANBP10Q6VN20 620 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 FAM83HQ6ZRV2 1179 aaPredicted RBP14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 AMZ2Q86W34 360 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 TMEM139Q8IV31 216 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 CACNA2D3Q8IZS8 1091 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 BEND7Q8N7W2 519 aaPredicted RBP14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 DTX3LQ8TDB6 740 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 EXTL1Q92935 676 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 RTP4Q96DX8 246 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 RNF31Q96EP0 1072 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 ARHGAP9Q9BRR9 750 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 FAM8A1Q9UBU6 413 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 MN1Q10571 1320 aaPredicted RBP14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 SDK2Q58EX2 2172 aa14.03□□□□□ -0.16
RTN3P1-201ENST00000536295 GOLGA6L9A6NEM1 432 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 CAPN5O15484 640 aaPredicted RBP14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 RAD1O60671 282 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 RASSF9O75901 435 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 LEPRP48357 1165 aaKnown RBP14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 SEPHS1P49903 392 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 FOXM1Q08050 763 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 NFE2L1Q14494 772 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 LINC00303Q3SY05 128 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 CEACAM20Q6UY09 585 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 WASH2PQ6VEQ5 465 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF605Q86T29 641 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 SYCE1Q8N0S2 351 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 RSC1A1Q92681 617 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 C9orf72Q96LT7 481 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 TEFMQ96QE5 360 aaKnown RBP14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 ASB8Q9H765 288 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 SLC40A1Q9NP59 571 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 WASH6PQ9NQA3 447 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 SMOXQ9NWM0 555 aa14.02□□□□□ -0.17
RTN3P1-201ENST00000536295 KALRNO60229 2985 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 CCL22O00626 93 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 POLR1CO15160 346 aaPredicted RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 KIF1CO43896 1103 aaKnown RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 KCNJ13O60928 360 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 SRP72O76094 671 aaKnown RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 CRTAMO95727 393 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 C9P02748 559 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 LIFP15018 202 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 CAPZBP47756 277 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 LONRF2Q1L5Z9 754 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 IRGCQ6NXR0 463 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 FAM92BQ6ZTR7 304 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 RBM12BQ8IXT5 1001 aaKnown RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 TAB3Q8N5C8 712 aaPredicted RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 FAM71DQ8N9W8 422 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 GPR150Q8NGU9 434 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 MED8Q96G25 268 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 FAM96AQ9H5X1 160 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 FBXO8Q9NRD0 319 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 IMP3Q9NV31 184 aaKnown RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 CRLS1Q9UJA2 301 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 PILRAQ9UKJ1 303 aa14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 CFAP20Q9Y6A4 193 aaKnown RBP14.01□□□□□ -0.17
RTN3P1-201ENST00000536295 MIF4GDA9UHW6 222 aaKnown RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 DDX3YO15523 660 aaKnown RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 STK17BO94768 372 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 ANKRD34CP0C6C1 535 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 SH3BP2P78314 561 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 DMPKQ09013 629 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 RPE65Q16518 533 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 DENND5AQ6IQ26 1287 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 MICALCLQ6ZW33 695 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 UNC5BQ8IZJ1 945 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 NLGN4XQ8N0W4 816 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 TXLNBQ8N3L3 684 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 EXD3Q8N9H8 876 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 TTC13Q8NBP0 860 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 NLGN4YQ8NFZ3 816 aaPredicted RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 LRRC45Q96CN5 670 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 DCUN1D1Q96GG9 259 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 ELMO2Q96JJ3 720 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 PPP1R2P1Q96PQ5 205 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 ZPBPQ9BS86 351 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 WWP1Q9H0M0 922 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 SIDT1Q9NXL6 827 aaKnown RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 IMPACTQ9P2X3 320 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 R3HDM2Q9Y2K5 976 aaKnown RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 DNMT3AQ9Y6K1 912 aaPredicted RBP14□□□□□ -0.17
RTN3P1-201ENST00000536295 CAPN6Q9Y6Q1 641 aa14□□□□□ -0.17
RTN3P1-201ENST00000536295 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 MGAT4DA6NG13 374 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 METTL18O95568 372 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 ITGB2P05107 769 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 FAM87AP0C7U9 286 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PLA2G2AP14555 144 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms