RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DERL2Q9GZP9 239 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TAS2R13Q9NYV9 303 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 CD300AQ9UGN4 299 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 NDUFAF1Q9Y375 327 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 DGKBQ9Y6T7 804 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 ACSL4O60488 711 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 POLR2EP19388 210 aaKnown RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 ARPP19P56211 112 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 C8orf82Q6P1X6 216 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PIWIL3Q7Z3Z3 882 aaKnown RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PIM3Q86V86 326 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PTGR2Q8N8N7 351 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 SNX19Q92543 992 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 HOPXQ9BPY8 73 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 FANCEQ9HB96 536 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 TMEM181Q9P2C4 612 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PCDHB7Q9Y5E2 793 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 SYCE1LA8MT33 242 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 AZIN1O14977 448 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 TRPC1P48995 793 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 TIAL1Q01085 375 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 TAF1AQ15573 450 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 CARTPTQ16568 116 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 SPATS1Q496A3 300 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 ATAD3BQ5T9A4 648 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 ABRAXAS1Q6UWZ7 409 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 ANKS3Q6ZW76 656 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 C11orf74Q86VG3 221 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 CIR1Q86X95 450 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 EPHX4Q8IUS5 362 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 ZNF486Q96H40 463 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 UBA2Q9UBT2 640 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-203ENST00000535977 PRELID1Q9Y255 219 aa17.74■□□□□ 0.43
RAB40C-203ENST00000535977 CCL22O00626 93 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 RGS13O14921 159 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 MUSKO15146 869 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 KERAO60938 352 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 ATP5C1P36542 298 aaKnown RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 SH3BP2P78314 561 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 EFL1Q7Z2Z2 1120 aaKnown RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 OVCA2Q8WZ82 227 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 PBXIP1Q96AQ6 731 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 ATOH8Q96SQ7 321 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 SH3GL1Q99961 368 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 CINPQ9BW66 212 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 RNF38Q9H0F5 515 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 GPN2Q9H9Y4 310 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 HMG20AQ9NP66 347 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 LCHNA4D1U4 455 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 C2orf81A6NN90 581 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 KDELR3O43731 214 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 CDK14O94921 469 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 CPNE6O95741 557 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 GPX3P22352 226 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 RAD51Q06609 339 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 CLEC6AQ6EIG7 209 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 RPS27LQ71UM5 84 aaKnown RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 CAMK1DQ8IU85 385 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 NKAPQ8N5F7 415 aaKnown RBP17.73■□□□□ 0.43
RAB40C-203ENST00000535977 OR13C4Q8NGS5 318 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 TSPEARQ8WU66 669 aa17.73■□□□□ 0.43
RAB40C-203ENST00000535977 SLC38A8A6NNN8 435 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 CD9P21926 228 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 HOXD9P28356 352 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-203ENST00000535977 ZNF140P52738 457 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-203ENST00000535977 OCA2Q04671 838 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 GALNT3Q14435 633 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 KANK2Q63ZY3 851 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 IL31Q6EBC2 164 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 KIAA2013Q8IYS2 634 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 RYBPQ8N488 228 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-203ENST00000535977 RAB2BQ8WUD1 216 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 RMND5AQ9H871 391 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 AKTIPQ9H8T0 292 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 MID1IP1Q9NPA3 183 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 POLE4Q9NR33 117 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 DNAJC15Q9Y5T4 150 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 VWA8A3KMH1 1905 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 FAM149AA5PLN7 773 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 PRORSD1PA6NEY8 169 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 AOC2O75106 756 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 CLDN11O75508 207 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 SEC14L2O76054 403 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 RHOBTB1O94844 696 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 MTHFD2P13995 350 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 GFAPP14136 432 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 SPCS2Q15005 226 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 DEFB115Q30KQ5 88 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 COQ5Q5HYK3 327 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 FUT10Q6P4F1 479 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 CYHR1Q6ZMK1 362 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 ERMP1Q7Z2K6 904 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 MIER2Q8N344 545 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 SLC43A3Q8NBI5 491 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms