RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 UBALD2Q8IYN6 164 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 RNF168Q8IYW5 571 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 PRSS33Q8NF86 280 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 OR14A16Q8NHC5 309 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 KCNG4Q8TDN1 519 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 AFAP1L1Q8TED9 768 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 SECISBP2LQ93073 1101 aaKnown RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 JAKMIP2Q96AA8 810 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 INTS12Q96CB8 462 aaKnown RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 YME1L1Q96TA2 773 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM47Q9BQJ4 181 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 FSD1Q9BTV5 496 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TEX13BQ9BXU2 312 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 FAM234AQ9H0X4 552 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ALDH8A1Q9H2A2 487 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MVB12BQ9H7P6 319 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MAP6D1Q9H9H5 199 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MAGEE1Q9HCI5 957 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 AATFQ9NY61 560 aaKnown RBP eCLIP3.34□□□□□ -1.871e-323■□□□□ 9
SNHG1-202ENST00000535689 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ADD3Q9UEY8 706 aaKnown RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 NAALADL1Q9UQQ1 740 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 PARP14Q460N5 1801 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 NAV1Q8NEY1 1877 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 LOC100509620A0A075B734 347 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 SYNDIG1LA6NDD5 238 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 DNAJC9-AS1A6NH13 148 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 C17orf100A8MU93 164 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 KDM4EB2RXH2 506 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 KLRF2D3W0D1 207 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MBTPS2O43462 519 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ATG13O75143 517 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 GLUD1P00367 558 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PGK2P07205 417 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ETFAP13804 333 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 CAPN3P20807 821 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 SAT1P21673 171 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 GNLYP22749 145 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 HOXA13P31271 388 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 RPL3P39023 403 aaKnown RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PSMB10P40306 273 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PIK3CAP42336 1068 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PTPN9P43378 593 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 GLUD2P49448 558 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 DCAF7P61962 342 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TBCEQ15813 527 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ETFDHQ16134 617 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TDRD12Q587J7 1177 aaKnown RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 RILPL1Q5EBL4 403 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 GGNBP1Q5YKI7 109 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 CXCL17Q6UXB2 119 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 C1orf122Q6ZSJ8 110 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ATG9AQ7Z3C6 839 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TLK2Q86UE8 772 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MB21D2Q8IYB1 491 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 CHURC1Q8WUH1 139 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 NUDCD1Q96RS6 583 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 RTP3Q9BQQ7 232 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 NUDT16L1Q9BRJ7 211 aaKnown RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MTG1Q9BT17 334 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 CRNKL1Q9BZJ0 848 aaKnown RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 DCLK3Q9C098 648 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 LHPPQ9H008 270 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TRPV6Q9H1D0 765 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MFSD1Q9H3U5 465 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 VCPKMTQ9H867 229 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PLAC1Q9HBJ0 212 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 HMG20BQ9P0W2 317 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 COPG2Q9UBF2 871 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MUTYHQ9UIF7 546 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TTC7AQ9ULT0 858 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM5Q9Y2B1 443 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 TTLL3Q9Y4R7 772 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 SESN1Q9Y6P5 492 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 FLT1P17948 1338 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 RFX7Q2KHR2 1363 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF292O60281 2723 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 PLXNA3P51805 1871 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 KMT2EQ8IZD2 1858 aa3.33□□□□□ -1.88
SNHG1-202ENST00000535689 MYH4Q9Y623 1939 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 MYO7AQ13402 2215 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CACNA1HO95180 2353 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 TPRP12270 2363 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 A0A0G2JK05 382 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 LY6G6EA0A0G2JKS1 128 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 LINC01553A4QN01 128 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 NPIPB15A6NHN6 443 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CBY3A6NI87 242 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 A6NNC1 897 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 H3BQ06 376 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 USO1O60763 962 aaKnown RBP3.32□□□□□ -1.88
SNHG1-202ENST00000535689 PAGE4O60829 102 aa3.32□□□□□ -1.88
SNHG1-202ENST00000535689 CRYABP02511 175 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms