RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RFX6	Q8HWS3	928 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DIS3L2	Q8IYB7	885 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	C8orf58	Q8NAV2	365 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CHDH	Q8NE62	594 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MCU	Q8NE86	351 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZMIZ2	Q8NF64	920 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SMARCD2	Q92925	531 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RBMXL1	Q96E39	390 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DAZAP1	Q96EP5	407 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZFYVE19	Q96K21	471 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF747	Q9BV97	191 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SPRTN	Q9H040	489 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	POLR1B	Q9H9Y6	1135 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PPP1R14D	Q9NXH3	145 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ALKBH4	Q9NXW9	302 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TBC1D14	Q9P2M4	693 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DNAJB4	Q9UDY4	337 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	STK39	Q9UEW8	545 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PLXND1	Q9Y4D7	1925 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GAGE10	A6NGK3	116 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TEX22	C9J3V5	150 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MCIDAS	D6RGH6	385 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NPIPB8	E9PQR5	432 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442		H7C1Q1	480 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RRH	O14718	337 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TSPAN4	O14817	238 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ORC4	O43929	436 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	USP12	O75317	370 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF853	P0CG23	659 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	UBL4A	P11441	157 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RARG	P13631	454 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	INSRR	P14616	1297 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HOXB9	P17482	250 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KRT4	P19013	534 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CHM	P24386	653 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GLUD2	P49448	558 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HARS2	P49590	506 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BNC1	Q01954	994 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GOLGA8F	Q08AF8	430 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PRKG2	Q13237	762 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PDE1C	Q14123	709 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TBCE	Q15813	527 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TSTD2	Q5T7W7	516 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FAM205BP	Q63HN1	556 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GJB7	Q6PEY0	223 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IL27RA	Q6UWB1	636 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TRIML1	Q8N9V2	468 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CREB3L4	Q8TEY5	395 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC9A6	Q92581	669 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LARP4B	Q92615	738 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SH3KBP1	Q96B97	665 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CCDC17	Q96LX7	622 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NR1H4	Q96RI1	486 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF347	Q96SE7	839 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ABHD14A	Q9BUJ0	271 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PLA2G12A	Q9BZM1	189 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BICC1	Q9H694	974 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TTC12	Q9H892	705 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IL17RB	Q9NRM6	502 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TMEM248	Q9NWD8	314 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HCN3	Q9P1Z3	774 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TUBE1	Q9UJT0	475 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FBXW11	Q9UKB1	542 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CCPG1	Q9ULG6	757 aa		4.63	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MYH8	P13535	1937 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RYR2	Q92736	4967 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442		K7ENM7	598 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TGFB1I1	O43294	461 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PTP4A3	O75365	173 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RPS6KA5	O75582	802 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CLEC3B	P05452	202 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ENO1	P06733	434 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HEXA	P06865	529 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TGM2	P21980	687 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TYK2	P29597	1187 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HOXA9	P31269	272 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GJC1	P36383	396 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DUSP3	P51452	185 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DRG2	P55039	364 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SET	Q01105	290 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZBTB16	Q05516	673 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ST3GAL1	Q11201	340 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IL13RA2	Q14627	380 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KPNB1	Q14974	876 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MEA1	Q16626	185 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FBXO43	Q4G163	708 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TTC39A	Q5SRH9	613 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CEP85	Q6P2H3	762 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC30A9	Q6PML9	568 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	VSTM1	Q6UX27	236 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ECHDC2	Q86YB7	292 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RHPN2	Q8IUC4	686 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PLD5	Q8N7P1	536 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CCDC89	Q8N998	374 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SETD9	Q8NE22	299 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TNIP2	Q8NFZ5	429 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	METTL6	Q8TCB7	284 aa		4.62	□□□□□ -1.67

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