RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CLCNKAP51800 687 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 GPX6P59796 221 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 ARHGAP8P85298 464 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF658BQ4V348 819 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 WDR93Q6P2C0 686 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 LRRTM4Q86VH4 590 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CILP2Q8IUL8 1156 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CNTN4Q8IWV2 1026 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CLDN19Q8N6F1 224 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 NETO1Q8TDF5 533 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CERS2Q96G23 380 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 LINC00615Q96LM1 132 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 TCF12Q99081 682 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 P2RY12Q9H244 342 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 NFU1Q9UMS0 254 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 DNMT3AQ9Y6K1 912 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CAPN7Q9Y6W3 813 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 OR2AG2A6NM03 316 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 TRIM38O00635 465 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 TPP1O14773 563 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 KMOO15229 486 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 S1PR4O95977 384 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 AK4P27144 223 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 SSTR1P30872 391 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 NSG1P42857 185 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 TTPAP49638 278 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 PRLHRP49683 370 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 GTF2H3Q13889 308 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 LRP8Q14114 963 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ELOCQ15369 112 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 UAP1L1Q3KQV9 507 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 HSP90AA5PQ58FG0 334 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF789Q5FWF6 425 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 AP1ARQ63HQ0 302 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 DET1Q7L5Y6 550 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 KCNMB4Q86W47 210 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 CCDC25Q86WR0 208 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 BEND7Q8N7W2 519 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF483Q8TF39 744 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 LPGAT1Q92604 370 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 C9orf72Q96LT7 481 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 TTC25Q96NG3 672 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 FMO2Q99518 471 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 TIMM29Q9BSF4 260 aa12.52□□□□□ -0.4
RPUSD4-208ENST00000533628 ASCC3Q8N3C0 2202 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 POP7O75817 140 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 AP2A2O94973 939 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 F7P08709 466 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 RALBP11234 206 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 TNFRSF8P28908 595 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 CTBP1Q13363 440 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 TCEA2Q15560 299 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 TEDDM1Q5T9Z0 273 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 CYS1Q717R9 158 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 CHST15Q7LFX5 561 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 BAHD1Q8TBE0 780 aaPredicted RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 IARS2Q9NSE4 1012 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 SPATS2LQ9NUQ6 558 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 NLGN3Q9NZ94 848 aa12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
RPUSD4-208ENST00000533628 SLC30A4O14863 429 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 FLRT2O43155 660 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 SH3BP5O60239 455 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 GSTA2P09210 222 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 MYBL2P10244 700 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 ACP5P13686 325 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 GABRB3P28472 473 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 SLC1A2P43004 574 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 DMPKQ09013 629 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 DEFB133Q30KQ1 61 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 UBAP2Q5T6F2 1119 aaKnown RBP12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
RPUSD4-208ENST00000533628 YTHDF3Q7Z739 585 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms