RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SEMA4CQ9C0C4 833 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 ASB8Q9H765 288 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 SLC40A1Q9NP59 571 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 SLC30A1Q9Y6M5 507 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 PRR19A6NJB7 356 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 OR2AG2A6NM03 316 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 CAPN5O15484 640 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-211ENST00000533492 RAD1O60671 282 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 RASSF9O75901 435 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 PRAMEF1O95521 474 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 CRTAMO95727 393 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 ITGB2P05107 769 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 PBLDP30039 288 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-211ENST00000533492 ADRA1AP35348 466 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 CTSCP53634 463 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 GFERP55789 205 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 PDE1BQ01064 536 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 CLCA4Q14CN2 919 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 XKR5Q6UX68 686 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 TTC13Q8NBP0 860 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 EXTL1Q92935 676 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 RTP4Q96DX8 246 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF514Q96K75 400 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-211ENST00000533492 C9orf72Q96LT7 481 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 GORASP1Q9BQQ3 440 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 SMOXQ9NWM0 555 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 OGFRQ9NZT2 677 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 WDR37Q9Y2I8 494 aa15.16■□□□□ 0.02
CPSF1-211ENST00000533492 MN1Q10571 1320 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-211ENST00000533492 MIF4GDA9UHW6 222 aaKnown RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 GAPDHSO14556 408 aaPredicted RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 C9P02748 559 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 ANKRD34CP0C6C1 535 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 WT1P19544 449 aaPredicted RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 CA5AP35218 305 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 SEPHS1P49903 392 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 CYP4F2P78329 520 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 FOXM1Q08050 763 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 DMPKQ09013 629 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 OLIG2Q13516 323 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 GPR18Q14330 331 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 FNBP1LQ5T0N5 605 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 DET1Q7L5Y6 550 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 GAS2L3Q86XJ1 694 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 NLGN4XQ8N0W4 816 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 NLGN4YQ8NFZ3 816 aaPredicted RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 DCUN1D1Q96GG9 259 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 ZDHHC12Q96GR4 267 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 TBL1YQ9BQ87 522 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 APMAPQ9HDC9 416 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 FEZ2Q9UHY8 353 aaPredicted RBP15.15■□□□□ 0.02
CPSF1-211ENST00000533492 FKBPLQ9UIM3 349 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 PILRAQ9UKJ1 303 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 PSMD13Q9UNM6 376 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 KCTD3Q9Y597 815 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 PIEZO2Q9H5I5 2752 aa15.15■□□□□ 0.02
CPSF1-211ENST00000533492 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 TOX3O15405 576 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 RALBP11234 206 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 LIFP15018 202 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 MAP4P27816 1152 aaKnown RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 TMPRSS15P98073 1019 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 NFE2L1Q14494 772 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 SPARCL1Q14515 664 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 IRGCQ6NXR0 463 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 BEND7Q8N7W2 519 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 SPC24Q8NBT2 197 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 KIAA1143Q96AT1 154 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 DESI2Q9BSY9 194 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 TRIT1Q9H3H1 467 aaKnown RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 IMPACTQ9P2X3 320 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 CRLS1Q9UJA2 301 aa15.14■□□□□ 0.01
CPSF1-211ENST00000533492 PACSIN2Q9UNF0 486 aaPredicted RBP15.14■□□□□ 0.01
CPSF1-211ENST00000533492 KLHL33A6NCF5 533 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 MGAT4DA6NG13 374 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 B8ZZF3 427 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 STK17BO94768 372 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 FTCDO95954 541 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 ITGALP20701 1170 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 HADHAP40939 763 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 CAPZBP47756 277 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 LEPRP48357 1165 aaKnown RBP15.13■□□□□ 0.01
CPSF1-211ENST00000533492 PLCL1Q15111 1095 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 RPE65Q16518 533 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 TBR1Q16650 682 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 PARP6Q2NL67 630 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 CACHD1Q5VU97 1274 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 METRNLQ641Q3 311 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 FAM83HQ6ZRV2 1179 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-211ENST00000533492 FAM92BQ6ZTR7 304 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 EXD3Q8N9H8 876 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 FAM71DQ8N9W8 422 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 OR13C4Q8NGS5 318 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 RSC1A1Q92681 617 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 ULK4Q96C45 1275 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 EFHD1Q9BUP0 239 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms