RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NOA1Q8NC60 698 aaKnown RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 OR6C4Q8NGE1 309 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 GPR150Q8NGU9 434 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 OR2L2Q8NH16 312 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SLC37A2Q8TED4 501 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 NAT6Q93015 286 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 TTC1Q99614 292 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 RAB17Q9H0T7 212 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 PLAC1Q9HBJ0 212 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 WASH6PQ9NQA3 447 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 IL1RAPL1Q9NZN1 696 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SCHIP1Q9P0W5 487 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 RNF215Q9Y6U7 377 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 FAM169AQ9Y6X4 670 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 TRBV23OR9-2A0A075B6M9 112 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 KLHL33A6NCF5 533 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 BHMG1C9JSJ3 638 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 GOLGA8KD6RF30 607 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 E7ESA3 106 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 GOLGA8TH3BQL2 631 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CASC3O15234 703 aaKnown RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 NUDT21O43809 227 aaKnown RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 OPA1O60313 960 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 TRIM16O95361 564 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 TOP3BO95985 862 aaKnown RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 POLBP06746 335 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ADRB1P08588 477 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CDK4P11802 303 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 BRAFP15056 766 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 GLB1P16278 677 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 IDSP22304 550 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 RPL10P27635 214 aaKnown RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 PMLP29590 882 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 PPARGP37231 505 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ELK3P41970 407 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 TTPAP49638 278 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 DRG2P55039 364 aaKnown RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CRYMQ14894 314 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 LONRF1Q17RB8 773 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 TYSND1Q2T9J0 566 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 AGAP9Q5VTM2 703 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 METRNLQ641Q3 311 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 MRNIPQ6NTE8 343 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 NEPROQ6NW34 567 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ABRAXAS1Q6UWZ7 409 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF438Q7Z4V0 828 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CHCHD4Q8N4Q1 142 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 OTUD6BQ8N6M0 293 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 MAPK15Q8TD08 544 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 SEC14L1Q92503 715 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ART4Q93070 314 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 LRRC39Q96DD0 335 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CCM2Q9BSQ5 444 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 NAT9Q9BTE0 207 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 LRIT1Q9P2V4 623 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 FAM8A1Q9UBU6 413 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
SSBP3-214ENST00000533209 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-214ENST00000533209 KIR2DS5A0A0G2JLQ3 304 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 A0A0G2JNG1 304 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 C17orf113A0A1B0GUU1 675 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 OR5K4A6NMS3 321 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 PDZK1P1A8MUH7 402 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 KIR2DS3K7RE56 304 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 QSOX1O00391 747 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 PPM1DO15297 605 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 HYAL3O43820 417 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF500O60304 480 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 NDUFS3O75489 264 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 TTC4O95801 387 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 SLC2A4P14672 509 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 OGNP20774 298 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 FASLGP48023 281 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 PLTPP55058 493 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CLDN6P56747 220 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 E2F1Q01094 437 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 INSM1Q01101 510 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 FOXC1Q12948 553 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 KIR2DS5Q14953 304 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CLCA4Q14CN2 919 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 FASTKD3Q14CZ7 662 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 SEPT7Q16181 437 aaKnown RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 STEAP4Q687X5 459 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CENPUQ71F23 418 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 SDCCAG8Q86SQ7 713 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
SSBP3-214ENST00000533209 CCNJLQ8IV13 435 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms