RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 MCFD2Q8NI22 146 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 MCOLN3Q8TDD5 553 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 MARCH2Q9P0N8 246 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 KCNH4Q9UQ05 1017 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 PCDHB5Q9Y5E4 795 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 MRPL42Q9Y6G3 142 aaKnown RBP9.3□□□□□ -0.92
BDNF-216ENST00000532997 A0A1W2PQH9 124 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 PDHXO00330 501 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 CACNG3O60359 315 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 ULK1O75385 1050 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 POMCP01189 267 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 IL6P05231 212 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 HALP42357 657 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 CYBRD1Q53TN4 286 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 SULT1C3Q6IMI6 304 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 DENND5AQ6IQ26 1287 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 CYP20A1Q6UW02 462 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 CHST15Q7LFX5 561 aaPredicted RBP9.3□□□□□ -0.92
BDNF-216ENST00000532997 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 CDC26Q8NHZ8 85 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 HASPINQ8TF76 798 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 PSMG2Q969U7 264 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 C1orf74Q96LT6 269 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 KAT8Q9H7Z6 458 aaKnown RBP9.3□□□□□ -0.92
BDNF-216ENST00000532997 REEP1Q9H902 201 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 EIF2B4Q9UI10 523 aaKnown RBP9.3□□□□□ -0.92
BDNF-216ENST00000532997 TLR6Q9Y2C9 796 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 NME7Q9Y5B8 376 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 HS3ST4Q9Y661 456 aa9.3□□□□□ -0.92
BDNF-216ENST00000532997 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 TTC24A2A3L6 582 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 NTRK1P04629 796 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PIRTP0C851 137 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ITGALP20701 1170 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 VARSP26640 1264 aaKnown RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 TWF1Q12792 350 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZNF177Q13360 481 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 SLC14A2Q15849 920 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 INO80DQ53TQ3 878 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PAQR9Q6ZVX9 377 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 TMEM151AQ8N4L1 468 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 VPS37AQ8NEZ2 397 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 OR4K2Q8NGD2 314 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PSMA8Q8TAA3 256 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ACDQ96AP0 544 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 CDCA5Q96FF9 252 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 CDKN2AIPNLQ96HQ2 116 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ITCHQ96J02 903 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 C3orf30Q96M34 536 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 OR52E6Q96RD3 313 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZNF556Q9HAH1 456 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PCDHA9Q9Y5H5 950 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 HEMK1Q9Y5R4 338 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 GPR45Q9Y5Y3 372 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PSME4Q14997 1843 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 TREHO43280 583 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 SH3BP5O60239 455 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 CYP11A1P05108 521 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 FYNP06241 537 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 CAPN1P07384 714 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 IL7RP16871 459 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 DGKAP23743 735 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 GNPDA1P46926 289 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 LSM3P62310 102 aaKnown RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 CSNK2BP67870 215 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ACOX1Q15067 660 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 SLC39A12Q504Y0 691 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 C6orf136Q5SQH8 315 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 SLC2A7Q6PXP3 512 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 AKAP14Q86UN6 197 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 TRIM69Q86WT6 500 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZFAND4Q86XD8 727 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ABHD11Q8NFV4 315 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 OR10A6Q8NH74 314 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 SNX19Q92543 992 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZNF382Q96SR6 550 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 CDK5RAP1Q96SZ6 601 aaKnown RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 SOX17Q9H6I2 414 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 KLQ9UEF7 1012 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ZMYM5Q9UJ78 669 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 RIMKLBQ9ULI2 386 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 ST3GAL5Q9UNP4 418 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 PCDHB1Q9Y5F3 818 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 LOC100130705A0A1B0GUX0 176 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.29□□□□□ -0.92
BDNF-216ENST00000532997 RHOCP08134 193 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 CCDC159P0C7I6 412 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 TIMM50Q3ZCQ8 353 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 FAM117BQ6P1L5 589 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 NECAB2Q7Z6G3 386 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 POC5Q8NA72 575 aa9.29□□□□□ -0.92
BDNF-216ENST00000532997 GPR150Q8NGU9 434 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms