RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 KIAA1522Q9P206 1035 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 EPS15L1Q9UBC2 864 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 VPS51Q9UID3 782 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 TRMT6Q9UJA5 497 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 CNOT11Q9UKZ1 510 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 LZTS1Q9Y250 596 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 MED16Q9Y2X0 877 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 NDUFAF1Q9Y375 327 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 DHRS7Q9Y394 339 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 PPIL1Q9Y3C6 166 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 ZNF711Q9Y462 761 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 SPO11Q9Y5K1 396 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 TNPO3Q9Y5L0 923 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 HTTP42858 3142 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 PTPRSQ13332 1948 aa5.66□□□□□ -1.5
ATPAF1-210ENST00000532925 PIKFYVEQ9Y2I7 2098 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 DNAH12Q6ZR08 3092 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 C15orf38-AP3S2A0A0A6YYH1 394 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 A0A0J9YYE9 177 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 LOC100653049A0A140TA62 436 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PRSS51A0A1B0GVH4 220 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 UBA6A0AVT1 1052 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 MAGEA13PA6NCF6 341 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 C2orf78A6NCI8 922 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 NEMP2A6NFY4 417 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 OR51F1A6NGY5 319 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CAPN8A6NHC0 703 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 A6NHS1 94 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PRR19A6NJB7 356 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 AGAP14A8MT82 685 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PSMD12O00232 456 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CBX4O00257 560 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 IFRD1O00458 451 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 NEMP1O14524 444 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ACOT8O14734 319 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 GIPC1O14908 333 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TRIM24O15164 1050 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 NRP2O60462 931 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 DNAJA2O60884 412 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TBL1XO60907 577 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CLASP2O75122 1294 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 GPC4O75487 556 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SMNDC1O75940 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 KRT34O76011 436 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ESRRBO95718 433 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TSPAN12O95859 305 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 IGSF6O95976 241 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TRBC1P01850 177 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 C8BP07358 591 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SNRPB2P08579 225 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 F7P08709 466 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 RPSAP08865 295 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CLTBP09497 229 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CBSLP0DN79 551 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 UROSP10746 265 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CCL5P13501 91 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 GFAPP14136 432 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 IDO1P14902 403 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ZNF7P17097 686 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 LBPP18428 481 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 MSH3P20585 1137 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ITGALP20701 1170 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 MC4RP32245 332 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CBSP35520 551 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CCR10P46092 362 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 RGS4P49798 205 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SGSHP51688 502 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 THOP1P52888 689 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 EPHA5P54756 1037 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 EPHB1P54762 984 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CCL23P55773 120 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 IL2P60568 153 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 C1QTNF8P60827 252 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 RHOAP61586 193 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CLCQ05315 142 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 BNIP2Q12982 314 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PEX6Q13608 980 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 FLOT2Q14254 428 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 DMC1Q14565 340 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TRIM60Q495X7 471 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SETMARQ53H47 684 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 XKR7Q5GH72 579 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CTSL3PQ5NE16 218 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SAMD4BQ5PRF9 694 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 RARS2Q5T160 578 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 OGFRL1Q5TC84 451 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 REP15Q6BDI9 236 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 NXNQ6DKJ4 435 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 GRAMD4Q6IC98 578 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ANO7Q6IWH7 933 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 CYHR1Q6ZMK1 362 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 MACC1Q6ZN28 852 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 SNX20Q7Z614 316 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 ARPINQ7Z6K5 226 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PIM3Q86V86 326 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 HPS6Q86YV9 775 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 TMC8Q8IU68 726 aa5.65□□□□□ -1.5
ATPAF1-210ENST00000532925 PHYKPLQ8IUZ5 450 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms