RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 DENND5AQ6IQ26 1287 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 WASH2PQ6VEQ5 465 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 FAM129CQ86XR2 697 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 CDKL3Q8IVW4 592 aaPredicted RBP18.61■□□□□ 0.57
SSH3-209ENST00000532600 EXD3Q8N9H8 876 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 CCDC110Q8TBZ0 833 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 SGF29Q96ES7 293 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 CTRCQ99895 268 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 FSD1LQ9BXM9 530 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.61■□□□□ 0.57
SSH3-209ENST00000532600 STN1Q9H668 368 aaKnown RBP18.61■□□□□ 0.57
SSH3-209ENST00000532600 APMAPQ9HDC9 416 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 WASH6PQ9NQA3 447 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 SMOXQ9NWM0 555 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 KLHL3Q9UH77 587 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 PDZK1P1A8MUH7 402 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 KCNN4O15554 427 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 C9P02748 559 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 TYRP1P17643 537 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 CETN2P41208 172 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 CYP4F2P78329 520 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 MC2RQ01718 297 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 SEL1L2Q5TEA6 688 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 CCDC181Q5TID7 509 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 ZDHHC20Q5W0Z9 365 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 TRAPPC5Q8IUR0 188 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 KLHDC8BQ8IXV7 354 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 GDAP1Q8TB36 358 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 BRSK1Q8TDC3 778 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 COG1Q8WTW3 980 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 RTP4Q96DX8 246 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 MS4A14Q96JA4 679 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 SPATA13Q96N96 652 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 ZMYND15Q9H091 742 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 SLC40A1Q9NP59 571 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 SIDT1Q9NXL6 827 aaKnown RBP18.6■□□□□ 0.57
SSH3-209ENST00000532600 COL6A6A6NMZ7 2263 aa18.6■□□□□ 0.57
SSH3-209ENST00000532600 POP7O75817 140 aaKnown RBP18.59■□□□□ 0.57
SSH3-209ENST00000532600 ANXA9O76027 345 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 VIPP01282 170 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 IDSP22304 550 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 LEPRP48357 1165 aaKnown RBP18.59■□□□□ 0.57
SSH3-209ENST00000532600 PPM1FP49593 454 aaPredicted RBP18.59■□□□□ 0.57
SSH3-209ENST00000532600 XIAPP98170 497 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 DMPKQ09013 629 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 GPR18Q14330 331 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 TAF1AQ15573 450 aaPredicted RBP18.59■□□□□ 0.57
SSH3-209ENST00000532600 ITPRIPL1Q6GPH6 555 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 DARS2Q6PI48 645 aaKnown RBP18.59■□□□□ 0.57
SSH3-209ENST00000532600 AVL9Q8NBF6 648 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 OR4K2Q8NGD2 314 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 GPR150Q8NGU9 434 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 ATG4AQ8WYN0 398 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 RSC1A1Q92681 617 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 EPB41L1Q9H4G0 881 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 FKBPLQ9UIM3 349 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 PILRAQ9UKJ1 303 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 PKP3Q9Y446 797 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 PCDHB11Q9Y5F2 797 aa18.59■□□□□ 0.57
SSH3-209ENST00000532600 OR2AG2A6NM03 316 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 STX7O15400 261 aaKnown RBP18.58■□□□□ 0.56
SSH3-209ENST00000532600 SGTAO43765 313 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 CEP104O60308 925 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 UBXN7O94888 489 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 PRAMEF1O95521 474 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 ANKRD34CP0C6C1 535 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 GTF2H3Q13889 308 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 NFE2L1Q14494 772 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 SPARCL1Q14515 664 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 LDLRAP1Q5SW96 308 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 DCAF12Q5T6F0 453 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 TMEM220Q6QAJ8 160 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 TIPARPQ7Z3E1 657 aaKnown RBP18.58■□□□□ 0.56
SSH3-209ENST00000532600 BEND7Q8N7W2 519 aaPredicted RBP18.58■□□□□ 0.56
SSH3-209ENST00000532600 OR13C4Q8NGS5 318 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 SLC35B2Q8TB61 432 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 ZNF398Q8TD17 642 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 EXTL1Q92935 676 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 C9orf72Q96LT7 481 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 OSBPL9Q96SU4 736 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 SLC12A9Q9BXP2 914 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 ASPSCR1Q9BZE9 553 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 FBXO8Q9NRD0 319 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 POT1Q9NUX5 634 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.58■□□□□ 0.56
SSH3-209ENST00000532600 SNX12Q9UMY4 172 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 ZKSCAN5Q9Y2L8 839 aa18.58■□□□□ 0.56
SSH3-209ENST00000532600 ZNF185O15231 689 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 KIF1CO43896 1103 aaKnown RBP18.57■□□□□ 0.56
SSH3-209ENST00000532600 PPFIA2O75334 1257 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 FGGP02679 453 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 PLA2G2AP14555 144 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 LIFP15018 202 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 LPOP22079 712 aaPredicted RBP18.57■□□□□ 0.56
SSH3-209ENST00000532600 TNNT3P45378 269 aaPredicted RBP18.57■□□□□ 0.56
SSH3-209ENST00000532600 ZNF140P52738 457 aaPredicted RBP18.57■□□□□ 0.56
SSH3-209ENST00000532600 RAB15P59190 212 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 PPP1CAP62136 330 aa18.57■□□□□ 0.56
SSH3-209ENST00000532600 ITGA9Q13797 1035 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms