RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 WDR49Q8IV35 697 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CPNE9Q8IYJ1 553 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 C12orf76Q8N812 135 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 GLIS1Q8NBF1 620 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ING5Q8WYH8 240 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF516Q92618 1163 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 OTULINQ96BN8 352 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MAP6Q96JE9 813 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 HOPXQ9BPY8 73 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 GTPBP2Q9BX10 602 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 BEX2Q9BXY8 128 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ACE2Q9BYF1 805 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC22A4Q9H015 551 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 C12orf10Q9HB07 376 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CYP4F12Q9HCS2 524 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 HMGXB4Q9UGU5 601 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF222Q9UK12 451 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PPME1Q9Y570 386 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ARAP2Q8WZ64 1704 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 A0A0U1RQF3 1178 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 A0A1B0GTW7 788 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 A0A1W2PQ67 120 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PABPN1LA6NDY0 278 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MEN1O00255 615 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 NRP1O14786 923 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 RECQL5O94762 991 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SUPT7LO94864 414 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 C7P10643 843 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CD247P20963 164 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CYP2F1P24903 491 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ITGB8P26012 769 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 IDUAP35475 653 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 NUDT1P36639 197 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LEPRP48357 1165 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF135P52742 658 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 POU6F2P78424 691 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MS4A2Q01362 244 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MAMLD1Q13495 774 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 GALEQ14376 348 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TIGD5Q53EQ6 642 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TMPRSS11AQ6ZMR5 421 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CDHR3Q6ZTQ4 885 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 DGLUCYQ7Z3D6 616 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ADHFE1Q8IWW8 467 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TRIM48Q8IWZ4 208 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CHCHD4Q8N4Q1 142 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKFN1Q8N957 763 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ATG16L2Q8NAA4 619 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 DEDD2Q8WXF8 326 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CPNE1Q99829 537 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TCF25Q9BQ70 676 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 THUMPD3Q9BV44 507 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 FTHL17Q9BXU8 183 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 B3GNT5Q9BYG0 378 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LHPPQ9H008 270 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LRRC40Q9H9A6 602 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ARHGEF4Q9NR80 690 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 KRT84Q9NSB2 600 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 KLQ9UEF7 1012 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 IPO11Q9UI26 975 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 GMPPBQ9Y5P6 360 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 WDR27A2RRH5 827 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 H3BUI4 141 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 H7C2Y5 167 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 DPYSL4O14531 572 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LRG1P02750 347 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TSPAN19P0C672 248 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 UMPSP11172 480 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 NCAM1P13591 858 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PAMP19021 973 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SDC4P31431 198 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PLA2G16P53816 162 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ITKQ08881 620 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PLD1Q13393 1074 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TUSC3Q13454 348 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 CBX2Q14781 532 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 VEPH1Q14D04 833 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 STILQ15468 1287 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 BMT2Q1RMZ1 405 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LRIT3Q3SXY7 679 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ATAD3CQ5T2N8 411 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 LIPMQ5VYY2 423 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM198Q66K66 360 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TYW3Q6IPR3 259 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 TIGD7Q6NT04 549 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 BHLHB9Q6PI77 547 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 MIER2Q8N344 545 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKRD52Q8NB46 1076 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 GTF2H4Q92759 462 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 PDCD10Q9BUL8 212 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 UCK2Q9BZX2 261 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SPRTNQ9H040 489 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 NECTIN3Q9NQS3 549 aa6.72□□□□□ -1.33
TGFBR3-209ENST00000532540 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms