RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	TRIM3	O75382	744 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CLPTM1	O96005	669 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GAST	P01350	101 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PABPC4L	P0CB38	370 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TCF4	P15884	667 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PGD	P52209	483 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ECT2L	Q008S8	904 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DR1	Q01658	176 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GRIK3	Q13003	919 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CDO1	Q16878	200 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SMUG1	Q53HV7	270 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KIAA1161	Q6NSJ0	714 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ZNF551	Q7Z340	670 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ADIPOR2	Q86V24	386 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SERINC5	Q86VE9	423 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ABI1	Q8IZP0	508 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TRPV1	Q8NER1	839 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LARP4B	Q92615	738 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NPIPB3	Q92617	1050 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KCNJ9	Q92806	393 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DAZAP1	Q96EP5	407 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC46A1	Q96NT5	459 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GPA33	Q99795	319 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C11orf70	Q9BRQ4	267 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	BTBD2	Q9BX70	525 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SIK2	Q9H0K1	926 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SEMA6C	Q9H3T2	930 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RIOX1	Q9H6W3	641 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MOCS1	Q9NZB8	636 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KL	Q9UEF7	1012 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ATPIF1	Q9UII2	106 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PALD1	Q9ULE6	856 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SH3TC1	Q8TE82	1336 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CGB1	A6NKQ9	187 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PRR23D1	E9PI22	279 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967		M0QZQ0	153 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ARHGEF9	O43307	516 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	AKAP8	O43823	692 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GLCE	O94923	617 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	UGT2B4	P06133	528 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RPSA	P08865	295 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PRR23D2	P0DMB1	279 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CYP2B6	P20813	491 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DRD1	P21728	446 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PTPN9	P43378	593 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SYK	P43405	635 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MNAT1	P51948	309 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CLDN8	P56748	225 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	B2M	P61769	119 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PTPRCAP	Q14761	206 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	VWC2	Q2TAL6	325 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KLHL40	Q2TBA0	621 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CERKL	Q49MI3	558 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ATL3	Q6DD88	541 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GLB1L	Q6UWU2	654 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C22orf34	Q6ZV56	151 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CENPL	Q8N0S6	344 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	UBLCP1	Q8WVY7	318 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MAIP1	Q8WWC4	291 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC41A3	Q96GZ6	507 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	C12orf66	Q96MD2	445 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DUSP23	Q9BVJ7	150 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SCNM1	Q9BWG6	230 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ASAH2	Q9NR71	780 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	WWOX	Q9NZC7	414 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	GGA1	Q9UJY5	639 aa		5.17	□□□□□ -1.58
ECHDC1-222	ENST00000531967	LRRIQ3	A6PVS8	624 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TRDMT1	O14717	391 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ANKRD28	O15084	1053 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TRIM24	O15164	1050 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NKX2-8	O15522	239 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DEAF1	O75398	565 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KDM4B	O94953	1096 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	NKX2-2	O95096	273 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	RAP2A	P10114	183 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	ANPEP	P15144	967 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PFKFB1	P16118	471 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	UGT1A6	P19224	532 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TACR2	P21452	398 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MMP8	P22894	467 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PBX1	P40424	430 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	SLC6A12	P48065	614 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CLK3	P49761	638 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PLCD1	P51178	756 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	DGKE	P52429	567 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FOXL2	P58012	376 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TCF15	Q12870	199 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MAB21L1	Q13394	359 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	TP53BP2	Q13625	1128 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FGFBP1	Q14512	234 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PDK3	Q15120	406 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	MTHFSD	Q2M296	383 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	FAM83E	Q2M2I3	478 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	KCTD11	Q693B1	232 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CCDC144NL	Q6NUI1	221 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	CHSY3	Q70JA7	882 aa		5.16	□□□□□ -1.58
ECHDC1-222	ENST00000531967	PIGW	Q7Z7B1	504 aa		5.16	□□□□□ -1.58

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