RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PANX3Q96QZ0 392 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 MCMBPQ9BTE3 642 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 ROPN1BQ9BZX4 212 aaPredicted RBP17.38■□□□□ 0.37
CTSB-222ENST00000531551 TCEAL2Q9H3H9 227 aaPredicted RBP17.38■□□□□ 0.37
CTSB-222ENST00000531551 SMOC1Q9H4F8 434 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 PPCSQ9HAB8 311 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 ROPN1Q9HAT0 212 aaPredicted RBP17.38■□□□□ 0.37
CTSB-222ENST00000531551 CORO1CQ9ULV4 474 aaPredicted RBP17.38■□□□□ 0.37
CTSB-222ENST00000531551 PLEKHM1Q9Y4G2 1056 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 SNX11Q9Y5W9 270 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 COMMD10Q9Y6G5 202 aa17.38■□□□□ 0.37
CTSB-222ENST00000531551 IQANK1A0A1B0GTG1 560 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 DYNC1I1O14576 645 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 KMOO15229 486 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 CDH16O75309 829 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 VPS26AO75436 327 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 JUNDP17535 347 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 HOXD12P35452 270 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 HK3P52790 923 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 CDKN2DP55273 166 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 BCL7AQ4VC05 210 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 PYCR3Q53H96 274 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 RABEPKQ7Z6M1 372 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 SPNS2Q8IVW8 549 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 ELMO1Q92556 727 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 OR2M4Q96R27 311 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 GPR22Q99680 433 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 CCM2Q9BSQ5 444 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 IRF2BPLQ9H1B7 796 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 GALPQ9UBC7 116 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 KLF15Q9UIH9 416 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 TRIM49D1C9J1S8 452 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 TCEA3O75764 348 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 CTSEP14091 401 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 BLKP51451 505 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 BOP1Q14137 746 aaKnown RBP17.37■□□□□ 0.37
CTSB-222ENST00000531551 LAIR1Q6GTX8 287 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 LRIG3Q6UXM1 1119 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 OTOAQ7RTW8 1153 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 PIM3Q86V86 326 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 PHACTR4Q8IZ21 702 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 SIDT2Q8NBJ9 832 aaKnown RBP17.37■□□□□ 0.37
CTSB-222ENST00000531551 GPR21Q99679 349 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 OLFM1Q99784 485 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 SLC13A1Q9BZW2 595 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 TMEM168Q9H0V1 697 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 KLC4Q9NSK0 619 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 TAS2R13Q9NYV9 303 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 PLXNB3Q9ULL4 1909 aa17.37■□□□□ 0.37
CTSB-222ENST00000531551 HMX2A2RU54 273 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 SNRPAP09012 282 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 KRT15P19012 456 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 CNTFP26441 200 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 TAS2R39P59534 338 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 ZNF460Q14592 562 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 RAPH1Q70E73 1250 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 CMC1Q7Z7K0 106 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 AMZ2Q86W34 360 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 TDRPQ86YL5 185 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 CFAP206Q8IYR0 622 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 KCNJ9Q92806 393 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 SCARF2Q96GP6 870 aaPredicted RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 OSGEPL1Q9H4B0 414 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 SPATS2LQ9NUQ6 558 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 SLC23A2Q9UGH3 650 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 APOBEC3BQ9UH17 382 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 TRMT6Q9UJA5 497 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 TSR3Q9UJK0 312 aaKnown RBP17.36■□□□□ 0.37
CTSB-222ENST00000531551 SLC6A14Q9UN76 642 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 KCNK6Q9Y257 313 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 PCDHGA5Q9Y5G8 931 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 DGKBQ9Y6T7 804 aa17.36■□□□□ 0.37
CTSB-222ENST00000531551 STMN1P16949 149 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CCR7P32248 378 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CTSKP43235 329 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 POU4F1Q01851 419 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 BNC1Q01954 994 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 HSPA14Q0VDF9 509 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 ILF2Q12905 390 aaKnown RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 GRIK2Q13002 908 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 C1orf61Q13536 156 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 SYTL3Q4VX76 610 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 C11orf96Q7Z7L8 435 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CYP4X1Q8N118 509 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 GMEB2Q9UKD1 530 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 MED16Q9Y2X0 877 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 FOXO6A8MYZ6 492 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 PHGDHO43175 533 aaKnown RBP17.35■□□□□ 0.37
CTSB-222ENST00000531551 SDC3O75056 442 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 CSF2P04141 144 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 VCLP18206 1134 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 FDXRP22570 491 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 TYK2P29597 1187 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 ARHGAP8P85298 464 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 NFE2L1Q14494 772 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 PRRT3Q5FWE3 981 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 UGT3A1Q6NUS8 523 aa17.35■□□□□ 0.37
CTSB-222ENST00000531551 RIBC1Q8N443 379 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms