RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GPSM1Q86YR5 675 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 TUSC5Q8IXB3 177 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 BICD2Q8TD16 824 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 ADAMTS14Q8WXS8 1223 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 CCDC47Q96A33 483 aaKnown RBP4.35□□□□□ -1.71
USP47-211ENST00000531513 CABS1Q96KC9 395 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 ZNF558Q96NG5 402 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 NEK1Q96PY6 1258 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 DDOQ99489 341 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 SH3GL2Q99962 352 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 TMEM204Q9BSN7 226 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 MLPHQ9BV36 600 aaPredicted RBP4.35□□□□□ -1.71
USP47-211ENST00000531513 TMEM39BQ9GZU3 492 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 PPP1R3EQ9H7J1 279 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 THSD1Q9NS62 852 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 TXLNGQ9NUQ3 528 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 TRMT1Q9NXH9 659 aaKnown RBP4.35□□□□□ -1.71
USP47-211ENST00000531513 TAS2R14Q9NYV8 317 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 RCOR1Q9UKL0 485 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 ACSL5Q9ULC5 683 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 ISY1Q9ULR0 285 aaKnown RBP4.35□□□□□ -1.71
USP47-211ENST00000531513 PCDHA12Q9UN75 941 aa4.35□□□□□ -1.71
USP47-211ENST00000531513 KDM4EB2RXH2 506 aaPredicted RBP4.34□□□□□ -1.71
USP47-211ENST00000531513 ZNF263O14978 683 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 PRAMEF11O60813 436 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 ATG13O75143 517 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 CAMTA2O94983 1202 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 NDUFB8O95169 186 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 GBAP04062 536 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 SUPT20HL2P0C7V6 817 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 HLA-DPA1P20036 260 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 HSPA4P34932 840 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 PRKCIP41743 596 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 PPP3CCP48454 512 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 LIMK1P53667 647 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 VWC2Q2TAL6 325 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 MYLK3Q32MK0 819 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 ASPHD1Q5U4P2 390 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 TPRG1Q6ZUI0 275 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 CCDC190Q86UF4 302 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 FBXO39Q8N4B4 442 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 AFAP1Q8N556 730 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 SLC44A5Q8NCS7 719 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 CTCFLQ8NI51 663 aaPredicted RBP4.34□□□□□ -1.71
USP47-211ENST00000531513 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 GPT2Q8TD30 523 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 SLC35F5Q8WV83 523 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 RSPH1Q8WYR4 309 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 KRT35Q92764 455 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 APBB2Q92870 758 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 EXOC4Q96A65 974 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 NXNL1Q96CM4 212 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 LRRC3BQ96PB8 259 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 SMC6Q96SB8 1091 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 PI4K2AQ9BTU6 479 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 KRTAP4-4Q9BYR3 166 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 PRMT7Q9NVM4 692 aaPredicted RBP4.34□□□□□ -1.71
USP47-211ENST00000531513 SLC9A2Q9UBY0 812 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 TTC7AQ9ULT0 858 aaPredicted RBP4.34□□□□□ -1.71
USP47-211ENST00000531513 COG5Q9UP83 839 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 KCNK7Q9Y2U2 307 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 IGSF1Q8N6C5 1336 aa4.34□□□□□ -1.71
USP47-211ENST00000531513 ASTN2O75129 1339 aaPredicted RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 A0A1W2PPM1 405 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 EIF4E1BA6NMX2 242 aaKnown RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 C19orf81C9J6K1 198 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 IFIT3O14879 490 aaKnown RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 CLIC2O15247 247 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SLC22A3O75751 556 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 KCNK5O95279 499 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SNRNP70P08621 437 aaKnown RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 G6PDP11413 515 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 PIGAP37287 484 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 BPIFB3P59826 476 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 GAD2Q05329 585 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ACTN3Q08043 901 aaPredicted RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 ACSM1Q08AH1 577 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ST3GAL1Q11201 340 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SMC1AQ14683 1233 aaKnown RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 C2orf76Q3KRA6 126 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ANKRD20A4Q4UJ75 823 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ANKRD20A8PQ5CZ79 823 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 GLRA4Q5JXX5 417 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ANKRD20A2Q5SQ80 823 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ANKRD20A1Q5TYW2 823 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 SFMBT2Q5VUG0 894 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ANKRD20A3Q5VUR7 823 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 FAM198BQ6UWH4 519 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ZNF595Q8IYB9 648 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 RASGEF1CQ8N431 466 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 ARRDC2Q8TBH0 407 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 EXT2Q93063 718 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 GFM1Q96RP9 751 aaKnown RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 INTS14Q96SY0 518 aa4.33□□□□□ -1.72
USP47-211ENST00000531513 WDR77Q9BQA1 342 aaPredicted RBP4.33□□□□□ -1.72
USP47-211ENST00000531513 ACAT2Q9BWD1 397 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms