RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 GPT2Q8TD30 523 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 FAM172AQ8WUF8 416 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 CHTF18Q8WVB6 975 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 RXFP2Q8WXD0 754 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 ZNF501Q96CX3 271 aaPredicted RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 CRACR2AQ9BSW2 395 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 TUBB2BQ9BVA1 445 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 RAB33BQ9H082 229 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 PDCL3Q9H2J4 239 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 SP110Q9HB58 689 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 OLAHQ9NV23 265 aa8.05□□□□□ -1.12
CD44-232ENST00000531118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.12
CD44-232ENST00000531118 FN1P02751 2386 aaKnown RBP8.05□□□□□ -1.12
CD44-232ENST00000531118 TLCD2A6NGC4 264 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 ARHGAP42A6NI28 874 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 TMEM200CA6NKL6 621 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 C2CD4BA6NLJ0 364 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PDZK1P1A8MUH7 402 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 MTA2O94776 668 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 KLK3P07288 261 aaPredicted RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 CTPS1P17812 591 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PAPOLAP51003 745 aaKnown RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 CLCNKAP51800 687 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 TDGF1P3P51864 188 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 NOMO3P69849 1222 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 NSUN2Q08J23 767 aaKnown RBP eCLIP8.04□□□□□ -1.12
CD44-232ENST00000531118 ABRQ12979 859 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 ZNF169Q14929 603 aaPredicted RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 PLEKHS1Q5SXH7 462 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PRAMEF17Q5VTA0 474 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 B3GNTL1Q67FW5 361 aaPredicted RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 TTI2Q6NXR4 508 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 KMT5CQ86Y97 462 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 SYTL1Q8IYJ3 562 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 D2HGDHQ8N465 521 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 EXD1Q8NHP7 514 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 CPT1BQ92523 772 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 CENPIQ92674 756 aaPredicted RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 CNDP1Q96KN2 507 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 FER1L6-AS2Q96M78 137 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PSKH2Q96QS6 385 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 MAP3K3Q99759 626 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 RIOK2Q9BVS4 552 aaKnown RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 RMI1Q9H9A7 625 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 MCCC2Q9HCC0 563 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 KLC4Q9NSK0 619 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PCMTD2Q9NV79 361 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 ZNF624Q9P2J8 865 aaPredicted RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 SIK3Q9Y2K2 1263 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 PCDHGC4Q9Y5F7 938 aa8.04□□□□□ -1.12
CD44-232ENST00000531118 INTS1Q8N201 2190 aaKnown RBP8.04□□□□□ -1.12
CD44-232ENST00000531118 TRGV8A0A0C4DH27 118 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 MASP2O00187 686 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 GRID2O43424 1007 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 NUAK1O60285 661 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 JRKO75564 520 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 ZNF202O95125 648 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 PGLSO95336 258 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 LSM8O95777 96 aaKnown RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 SLC9A1P19634 815 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 RFC1P35251 1148 aaPredicted RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 ARL4DP49703 201 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 RENBPP51606 427 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 TPI1P60174 286 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 CDC16Q13042 620 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 STIM1Q13586 685 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 RFTN1Q14699 578 aaPredicted RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 PTCHD3Q3KNS1 767 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 TAF3Q5VWG9 929 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 NAA35Q5VZE5 725 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 MTFR2Q6P444 385 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 CRTC3Q6UUV7 619 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 SPOCD1Q6ZMY3 1216 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 SLFN11Q7Z7L1 901 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 ARHGAP12Q8IWW6 846 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 RBM12BQ8IXT5 1001 aaKnown RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 AOPEPQ8N6M6 819 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 BCORP1Q8N888 145 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 OR8K5Q8NH50 307 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 COG1Q8WTW3 980 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 SCRN2Q96FV2 425 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 AGAP3Q96P47 875 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 IP6K3Q96PC2 410 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 GSDMAQ96QA5 445 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 SMIM14Q96QK8 99 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 SLC39A8Q9C0K1 460 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 CARD9Q9H257 536 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 KCND1Q9NSA2 647 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
CD44-232ENST00000531118 PADI2Q9Y2J8 665 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 NEU2Q9Y3R4 380 aa8.03□□□□□ -1.12
CD44-232ENST00000531118 FAM221AA4D161 298 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 FADS2P1A8MWK0 482 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 C9J4A7 227 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms