RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 RAD9BQ6WBX8 426 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 CACNA2D3Q8IZS8 1091 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 SYCE1Q8N0S2 351 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 BEND7Q8N7W2 519 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 C9orf72Q96LT7 481 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 BAG1Q99933 345 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 EFHD1Q9BUP0 239 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 LACRTQ9GZZ8 138 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 EPHA6Q9UF33 1036 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 AMFRQ9UKV5 643 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 GOLGA6L9A6NEM1 432 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 B8ZZF3 427 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 GAPDHSO14556 408 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 POLR1CO15160 346 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 KCNN4O15554 427 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 RAD1O60671 282 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 CRTAMO95727 393 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 PYGMP11217 842 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 MAPK9P45984 424 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 KIF5AQ12840 1032 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 SRSF6Q13247 344 aaKnown RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 PLA2G4EQ3MJ16 856 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 LINC00303Q3SY05 128 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 GPRC6AQ5T6X5 926 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 TMEM220Q6QAJ8 160 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 VASH2Q86V25 355 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 KLHDC8BQ8IXV7 354 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 NLGN4XQ8N0W4 816 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 UBL4BQ8N7F7 174 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 RASGEF1AQ8N9B8 481 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 NLGN4YQ8NFZ3 816 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 ZFPM2Q8WW38 1151 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 ALG3Q92685 438 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 PMEPA1Q969W9 287 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 IMPACTQ9P2X3 320 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 TMEM184BQ9Y519 407 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-207ENST00000527189 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 SDK2Q58EX2 2172 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 BOD1L1Q8NFC6 3051 aa13.15□□□□□ -0.3
CAPN1-207ENST00000527189 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 OR52A4PA6NMU1 304 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 AGAP14A8MT82 685 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 F5H423 210 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 SRP72O76094 671 aaKnown RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 TYRP1P17643 537 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 MSH3P20585 1137 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 HADHAP40939 763 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 CTSCP53634 463 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ABHD18Q0P651 414 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 MSLNQ13421 630 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 MAP7Q14244 749 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 GPR18Q14330 331 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 IL11RAQ14626 422 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 CYB5D1Q6P9G0 228 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 PEX26Q7Z412 305 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 OR4K2Q8NGD2 314 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 HEXDCQ8WVB3 486 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 SLC12A9Q9BXP2 914 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ZNF768Q9H5H4 540 aaKnown RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ASB8Q9H765 288 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
CAPN1-207ENST00000527189 KLHL3Q9UH77 587 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 WDR37Q9Y2I8 494 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 ARL5AQ9Y689 179 aa13.14□□□□□ -0.31
CAPN1-207ENST00000527189 MYO9AB2RTY4 2548 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 MGAT4DA6NG13 374 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 BUD23O43709 281 aaKnown RBP13.13□□□□□ -0.31
CAPN1-207ENST00000527189 RALBP11234 206 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-207ENST00000527189 PSMB4P28070 264 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms