RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 DNAJB8Q8NHS0 232 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 FUBP1Q96AE4 644 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 SLC39A13Q96H72 371 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 PDGFDQ9GZP0 370 aaPredicted RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 AGO3Q9H9G7 860 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.9□□□□□ -1.14
BDNF-213ENST00000525950 ANKMY1Q9P2S6 941 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 NEUROG3Q9Y4Z2 214 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 LOC100130705A0A1B0GUX0 176 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ISPDA4D126 451 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ANKRD28O15084 1053 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 KPNA6O60684 536 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 KCNH1O95259 989 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 CHRNA1P02708 482 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 RETP07949 1114 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 HNRNPFP52597 415 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 RAD23AP54725 363 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 IL10RBQ08334 325 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 KIAA0040Q15053 153 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 CTU2Q2VPK5 515 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 TIGD2Q4W5G0 525 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ATP6AP1LQ52LC2 224 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ALG1LQ6GMV1 187 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 Q6ZSR9 355 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 C14orf80Q86SX3 495 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ADHFE1Q8IWW8 467 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ATP6V0D2Q8N8Y2 350 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 OR6Q1Q8NGQ2 317 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 OR2T11Q8NH01 316 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 DNAJB3Q8WWF6 145 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 TRIB2Q92519 343 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 YIPF6Q96EC8 236 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 REXO5Q96IC2 774 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 SH3GL1Q99961 368 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 ABHD16BQ9H3Z7 469 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 SP140LQ9H930 580 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 DNMT3BQ9UBC3 853 aaKnown RBP7.9□□□□□ -1.14
BDNF-213ENST00000525950 VPS9D1Q9Y2B5 631 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 MED16Q9Y2X0 877 aa7.9□□□□□ -1.14
BDNF-213ENST00000525950 GBF1Q92538 1859 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 A0A1B0GTL3 188 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 HAS3O00219 553 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 TNFRSF10BO14763 440 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 SLC4A1P02730 911 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 THP07101 528 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 ODC1P11926 461 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 MSH3P20585 1137 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 DSC2Q02487 901 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 MVKQ03426 396 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 SLC10A7Q0GE19 358 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 SEMA3AQ14563 771 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 MEP1AQ16819 746 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 SYT6Q5T7P8 510 aaPredicted RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 FAM219BQ5XKK7 198 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 PLEKHG7Q6ZR37 379 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 GPRIN3Q6ZVF9 776 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 HIPK1Q86Z02 1210 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 RYBPQ8N488 228 aaPredicted RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 GPRC5AQ8NFJ5 357 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 FAR1Q8WVX9 515 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 CASP10Q92851 521 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 EXT2Q93063 718 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 HGH1Q9BTY7 390 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 TRIM8Q9BZR9 551 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 DUSP21Q9H596 190 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 ATP13A3Q9H7F0 1226 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 CPNE5Q9HCH3 593 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 SEMA4BQ9NPR2 832 aaPredicted RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 PAK1IP1Q9NWT1 392 aaPredicted RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 UXTQ9UBK9 157 aaPredicted RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 WARS2Q9UGM6 360 aaKnown RBP7.9□□□□□ -1.15
BDNF-213ENST00000525950 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 PTPRDP23468 1912 aa7.9□□□□□ -1.15
BDNF-213ENST00000525950 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 PFDN6O15212 129 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 IL7RP16871 459 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 PTPN2P17706 415 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 CD40LGP29965 261 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 FADDQ13158 208 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 KCNAB2Q13303 367 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 POLD3Q15054 466 aaPredicted RBP7.89□□□□□ -1.15
BDNF-213ENST00000525950 HIST2H2ACQ16777 129 aaPredicted RBP7.89□□□□□ -1.15
BDNF-213ENST00000525950 TUBA3EQ6PEY2 450 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 SLC2A7Q6PXP3 512 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 SLCO6A1Q86UG4 719 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 SPNS2Q8IVW8 549 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 SETD9Q8NE22 299 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 ZNF548Q8NEK5 533 aaPredicted RBP7.89□□□□□ -1.15
BDNF-213ENST00000525950 OR7A2PQ8NGA2 310 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 CHAC2Q8WUX2 184 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 HMCESQ96FZ2 354 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 DACH2Q96NX9 599 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 ZYG11BQ9C0D3 744 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 GABARAPL1Q9H0R8 117 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 NLE1Q9NVX2 485 aaPredicted RBP7.89□□□□□ -1.15
BDNF-213ENST00000525950 THG1LQ9NWX6 298 aaKnown RBP7.89□□□□□ -1.15
BDNF-213ENST00000525950 USP22Q9UPT9 525 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 UGT2A1Q9Y4X1 527 aa7.89□□□□□ -1.15
BDNF-213ENST00000525950 TIMM22Q9Y584 194 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms