RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
LRRK1-202ENST00000525284 TRAF6Q9Y4K3 522 aa13.56□□□□□ -0.24
LRRK1-202ENST00000525284 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 GSC2O15499 205 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 NME6O75414 186 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 APLP1P51693 650 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 CUZD1Q86UP6 607 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF565Q8N9K5 539 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MSANTD3Q96H12 275 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 OR6C6A6NF89 314 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 GABRB2P47870 512 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 TMPRSS11BQ86T26 416 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ECHDC2Q86YB7 292 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 TRPM4Q8TD43 1214 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 LRTOMTQ8WZ04 291 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 IFT27Q9BW83 186 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 TEX13DA0A0J9YY54 714 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 GNB3P16520 340 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MAGEA8P43361 318 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ELOA3BQ3SY89 546 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FAM46CQ5VWP2 391 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FAM151BQ6UXP7 276 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 C16orf86Q6ZW13 317 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ANKRD13AQ8IZ07 590 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ELOA3Q8NG57 546 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 OR5T1Q8NG75 326 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FAM110BQ8TC76 370 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 NSMCE3Q96MG7 304 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ZYG11BQ9C0D3 744 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 C1orf109Q9NX04 203 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FFAR2O15552 330 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 NOBOXO60393 691 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 POTEHQ6S545 545 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 MOXD1Q6UVY6 613 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FUZQ9BT04 418 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 C14orf166Q9Y224 244 aaKnown RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 CETPP11597 493 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 HK1P19367 917 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 C2orf80Q0P641 193 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 CBX2Q14781 532 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 FIGNQ5HY92 759 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 RDH11Q8TC12 318 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ATP13A3Q9H7F0 1226 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 TAS2R3Q9NYW6 316 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 RAB21Q9UL25 225 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
LRRK1-202ENST00000525284 NEO1Q92859 1461 aa13.55□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 PRMT5O14744 637 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 MPSTP25325 297 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 HTR1BP28222 390 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 CHRNA5P30532 468 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 RAB4BP61018 213 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 LRRN1Q6UXK5 716 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 LPGAT1Q92604 370 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ADAM7Q9H2U9 754 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 MARCH2Q9P0N8 246 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 KCNJ13O60928 360 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 XYLBO75191 536 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 WFS1O76024 890 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 RAB4AP20338 218 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 CAPZA1P52907 286 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 TTYH2Q9BSA4 534 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 C2orf49Q9BVC5 232 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SLC5A7Q9GZV3 580 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 UGT2B4P06133 528 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 CXCR3P49682 368 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 MAXP61244 160 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 RFTN2Q52LD8 501 aaPredicted RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
LRRK1-202ENST00000525284 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
LRRK1-202ENST00000525284 PEX13Q92968 403 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms