RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 VPS4BO75351 444 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MOSPD3O75425 235 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 WDR47O94967 919 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 AGFG2O95081 481 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MED26O95402 600 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CSTAP01040 98 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 TGFB1P01137 390 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 FAM87AP0C7U9 286 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ODC1P11926 461 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 TCF4P15884 667 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CYP3A7P24462 503 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CCND3P30281 292 aaPredicted RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 VIPR1P32241 457 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 GJC1P36383 396 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CETN2P41208 172 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 PTPN9P43378 593 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CSNK2BP67870 215 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ADORA2A-AS1P86434 159 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 SHC2P98077 582 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 TIAL1Q01085 375 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD44-213ENST00000525209 SEMA3BQ13214 749 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ALKBH1Q13686 389 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 IL18Q14116 193 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 RNPS1Q15287 305 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 NAB2Q15742 525 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 PDK4Q16654 411 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 AP5B1Q2VPB7 878 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 NKAIN1Q4KMZ8 207 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 C10orf120Q5SQS8 335 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 DPP8Q6V1X1 898 aaPredicted RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 CXXC5Q7LFL8 322 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 MRPL10Q7Z7H8 261 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 CABP7Q86V35 215 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 PALM2Q8IXS6 379 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 EFCAB13Q8IY85 973 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CSGALNACT2Q8N6G5 542 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 C11orf44Q8N8P7 122 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 BEND2Q8NDZ0 799 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 GOLGA5Q8TBA6 731 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 DDI1Q8WTU0 396 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 LIPHQ8WWY8 451 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CDKL2Q92772 493 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ISG20Q96AZ6 181 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 TRMT61AQ96FX7 289 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 HMCESQ96FZ2 354 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 HHIPL1Q96JK4 782 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 RPGRIP1Q96KN7 1286 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 KLHL32Q96NJ5 620 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ANKRD27Q96NW4 1050 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MTMR9Q96QG7 549 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 PANX3Q96QZ0 392 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 DIRC2Q96SL1 478 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MRI1Q9BV20 369 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 ATG10Q9H0Y0 220 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 SLCO5A1Q9H2Y9 848 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 C12orf65Q9H3J6 166 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 CXorf36Q9H7Y0 433 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 WDR6Q9NNW5 1121 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 BABAM1Q9NWV8 329 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MTMR4Q9NYA4 1195 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 EHD3Q9NZN3 535 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 KLHL8Q9P2G9 620 aaPredicted RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 IMPACTQ9P2X3 320 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CHRNA9Q9UGM1 479 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 MRPS17Q9Y2R5 130 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 PCF11O94913 1555 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 WDR7Q9Y4E6 1490 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 FAM237AA0A1B0GTK4 181 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PQ27 194 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PQ64 194 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PQC6 194 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PQD8 194 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HELTA6NFD8 242 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ANKDD1BA6NHY2 528 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 AHRRA9YTQ3 701 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ZNF213O14771 459 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ANKRD28O15084 1053 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ALOX15BO15296 676 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 DHX15O43143 795 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 ATG13O75143 517 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 PDE9AO76083 593 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 GLCEO94923 617 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 NKX2-2O95096 273 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 LGI1O95970 557 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ADAP00813 363 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 AMHP03971 560 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HEXAP06865 529 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 GLI2P10070 1586 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 IRF1P10914 325 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CYP19A1P11511 503 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 CYP4B1P13584 511 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 RPA2P15927 270 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ZNF24P17028 368 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CD72P21854 359 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 POU1F1P28069 291 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HOXD9P28356 352 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms