RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 MYO9BQ13459 2157 aa15.06■□□□□ 0
BEST1-204ENST00000524926 KPNA3O00505 521 aaPredicted RBP15.06■□□□□ 0
BEST1-204ENST00000524926 LINC00032P0C843 101 aa15.06■□□□□ 0
BEST1-204ENST00000524926 ETV3P41162 512 aa15.06■□□□□ 0
BEST1-204ENST00000524926 ERFP50548 548 aa15.06■□□□□ 0
BEST1-204ENST00000524926 TBL3Q12788 808 aaKnown RBP15.06■□□□□ 0
BEST1-204ENST00000524926 KCNC3Q14003 757 aa15.06■□□□□ 0
BEST1-204ENST00000524926 SQLEQ14534 574 aa15.06■□□□□ 0
BEST1-204ENST00000524926 C18orf21Q32NC0 220 aaPredicted RBP15.06■□□□□ 0
BEST1-204ENST00000524926 FNDC3BQ53EP0 1204 aaKnown RBP15.06■□□□□ 0
BEST1-204ENST00000524926 KYQ8NBH2 561 aa15.06■□□□□ 0
BEST1-204ENST00000524926 RCN3Q96D15 328 aa15.06■□□□□ 0
BEST1-204ENST00000524926 EPOPA6NHQ4 379 aa15.05■□□□□ 0
BEST1-204ENST00000524926 RFXAPO00287 272 aa15.05■□□□□ 0
BEST1-204ENST00000524926 MTX2O75431 263 aa15.05■□□□□ 0
BEST1-204ENST00000524926 PDE5AO76074 875 aa15.05■□□□□ 0
BEST1-204ENST00000524926 ESRRBO95718 433 aa15.05■□□□□ 0
BEST1-204ENST00000524926 OR56A5P0C7T3 313 aa15.05■□□□□ 0
BEST1-204ENST00000524926 HLA-EP13747 358 aa15.05■□□□□ 0
BEST1-204ENST00000524926 RIPOR1Q6ZS17 1223 aa15.05■□□□□ 0
BEST1-204ENST00000524926 SYVN1Q86TM6 617 aa15.05■□□□□ 0
BEST1-204ENST00000524926 EFCAB3Q8N7B9 438 aa15.05■□□□□ 0
BEST1-204ENST00000524926 DCBLD1Q8N8Z6 715 aa15.05■□□□□ 0
BEST1-204ENST00000524926 TUBGCP3Q96CW5 907 aa15.05■□□□□ 0
BEST1-204ENST00000524926 DCUN1D1Q96GG9 259 aa15.05■□□□□ 0
BEST1-204ENST00000524926 EGFL8Q99944 293 aa15.05■□□□□ 0
BEST1-204ENST00000524926 LMAN2LQ9H0V9 348 aa15.05■□□□□ 0
BEST1-204ENST00000524926 TUBB1Q9H4B7 451 aa15.05■□□□□ 0
BEST1-204ENST00000524926 MRGBPQ9NV56 204 aa15.05■□□□□ 0
BEST1-204ENST00000524926 THG1LQ9NWX6 298 aaKnown RBP15.05■□□□□ 0
BEST1-204ENST00000524926 KCTD5Q9NXV2 234 aa15.05■□□□□ 0
BEST1-204ENST00000524926 CCDC167Q9P0B6 97 aa15.05■□□□□ 0
BEST1-204ENST00000524926 TMPRSS11EQ9UL52 423 aa15.05■□□□□ 0
BEST1-204ENST00000524926 PSMD12O00232 456 aaPredicted RBP15.05■□□□□ -0
BEST1-204ENST00000524926 VASPP50552 380 aaPredicted RBP15.05■□□□□ -0
BEST1-204ENST00000524926 ART3Q13508 389 aa15.05■□□□□ -0
BEST1-204ENST00000524926 FASTKQ14296 549 aaKnown RBP15.05■□□□□ -0
BEST1-204ENST00000524926 HERC3Q15034 1050 aa15.05■□□□□ -0
BEST1-204ENST00000524926 CCDC6Q16204 474 aa15.05■□□□□ -0
BEST1-204ENST00000524926 TRMT5Q32P41 509 aaKnown RBP15.05■□□□□ -0
BEST1-204ENST00000524926 GK5Q6ZS86 529 aa15.05■□□□□ -0
BEST1-204ENST00000524926 DSELQ8IZU8 1212 aa15.05■□□□□ -0
BEST1-204ENST00000524926 FAM83CQ9BQN1 747 aa15.05■□□□□ -0
BEST1-204ENST00000524926 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
BEST1-204ENST00000524926 NOL11Q9H8H0 719 aaKnown RBP15.05■□□□□ -0
BEST1-204ENST00000524926 EFCAB1Q9HAE3 211 aa15.05■□□□□ -0
BEST1-204ENST00000524926 SLC28A3Q9HAS3 691 aa15.05■□□□□ -0
BEST1-204ENST00000524926 GDE1Q9NZC3 331 aa15.05■□□□□ -0
BEST1-204ENST00000524926 GIMAP2Q9UG22 337 aa15.05■□□□□ -0
BEST1-204ENST00000524926 OARD1Q9Y530 152 aa15.05■□□□□ -0
BEST1-204ENST00000524926 TNPO3Q9Y5L0 923 aaKnown RBP15.05■□□□□ -0
BEST1-204ENST00000524926 ATG2AQ2TAZ0 1938 aa15.04■□□□□ -0
BEST1-204ENST00000524926 TSPAN11A1L157 253 aa15.04■□□□□ -0
BEST1-204ENST00000524926 KRT36O76013 467 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ANP32DO95626 131 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ATP1B2P14415 290 aaPredicted RBP15.04■□□□□ -0
BEST1-204ENST00000524926 CCR7P32248 378 aa15.04■□□□□ -0
BEST1-204ENST00000524926 AGKQ53H12 422 aa15.04■□□□□ -0
BEST1-204ENST00000524926 TANGO2Q6ICL3 276 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ERAP2Q6P179 960 aa15.04■□□□□ -0
BEST1-204ENST00000524926 C16orf89Q6UX73 402 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ENDOVQ8N8Q3 282 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 SNX31Q8N9S9 440 aa15.04■□□□□ -0
BEST1-204ENST00000524926 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 CDK15Q96Q40 435 aa15.04■□□□□ -0
BEST1-204ENST00000524926 RIOK2Q9BVS4 552 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 NOP53Q9NZM5 478 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 DKK3Q9UBP4 350 aa15.04■□□□□ -0
BEST1-204ENST00000524926 MBD1Q9UIS9 605 aaPredicted RBP15.04■□□□□ -0
BEST1-204ENST00000524926 MSRAQ9UJ68 235 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ZNF225Q9UK10 706 aa15.04■□□□□ -0
BEST1-204ENST00000524926 SARDHQ9UL12 918 aa15.04■□□□□ -0
BEST1-204ENST00000524926 PLXNB3Q9ULL4 1909 aa15.04■□□□□ -0
BEST1-204ENST00000524926 IGLV3-16A0A075B6K0 115 aa15.04■□□□□ -0
BEST1-204ENST00000524926 SORBS2O94875 1100 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 CHEK2O96017 543 aa15.04■□□□□ -0
BEST1-204ENST00000524926 HSPA14Q0VDF9 509 aa15.04■□□□□ -0
BEST1-204ENST00000524926 GRIN2CQ14957 1233 aa15.04■□□□□ -0
BEST1-204ENST00000524926 RCN1Q15293 331 aa15.04■□□□□ -0
BEST1-204ENST00000524926 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -0
BEST1-204ENST00000524926 PHKG1Q16816 387 aa15.04■□□□□ -0
BEST1-204ENST00000524926 GAB4Q2WGN9 574 aa15.04■□□□□ -0
BEST1-204ENST00000524926 GPRIN3Q6ZVF9 776 aa15.04■□□□□ -0
BEST1-204ENST00000524926 PARS2Q7L3T8 475 aaKnown RBP15.04■□□□□ -0
BEST1-204ENST00000524926 GPR149Q86SP6 731 aa15.04■□□□□ -0
BEST1-204ENST00000524926 OR52B6Q8NGF0 335 aa15.04■□□□□ -0
BEST1-204ENST00000524926 SKA2Q8WVK7 121 aaPredicted RBP15.04■□□□□ -0
BEST1-204ENST00000524926 ATP6V1E2Q96A05 226 aa15.04■□□□□ -0
BEST1-204ENST00000524926 NPAS2Q99743 824 aa15.04■□□□□ -0
BEST1-204ENST00000524926 ZFP14Q9HCL3 533 aa15.04■□□□□ -0
BEST1-204ENST00000524926 DZANK1Q9NVP4 752 aa15.04■□□□□ -0
BEST1-204ENST00000524926 REV3LO60673 3130 aa15.03■□□□□ -0
BEST1-204ENST00000524926 CEP290O15078 2479 aa15.03■□□□□ -0
BEST1-204ENST00000524926 CFLARO15519 480 aa15.03■□□□□ -0
BEST1-204ENST00000524926 OR4F21O95013 312 aa15.03■□□□□ -0
BEST1-204ENST00000524926 PAPLNO95428 1278 aa15.03■□□□□ -0
BEST1-204ENST00000524926 PSMG1O95456 288 aa15.03■□□□□ -0
BEST1-204ENST00000524926 ELFN1P0C7U0 828 aa15.03■□□□□ -0
BEST1-204ENST00000524926 UROSP10746 265 aa15.03■□□□□ -0
BEST1-204ENST00000524926 ENO3P13929 434 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms