RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 USP36Q9P275 1121 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 SLC17A6Q9P2U8 582 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 SERGEFQ9UGK8 458 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 SLC25A13Q9UJS0 675 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 APOBEC2Q9Y235 224 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 CHKBQ9Y259 395 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 RAP2CQ9Y3L5 183 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ACTL7AQ9Y615 435 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ANKRD36A6QL64 1941 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 DMXL1Q9Y485 3027 aa7□□□□□ -1.29
VPS11-201ENST00000524454 TRBV5-4A0A0C4DH59 114 aa7□□□□□ -1.29
VPS11-201ENST00000524454 GOLGA8QA0A0J9YX86 632 aa7□□□□□ -1.29
VPS11-201ENST00000524454 A0A1W2PP55 124 aa7□□□□□ -1.29
VPS11-201ENST00000524454 LNP1A1A4G5 178 aa7□□□□□ -1.29
VPS11-201ENST00000524454 CCDC162PA2VCL2 907 aa7□□□□□ -1.29
VPS11-201ENST00000524454 GOLGA8OA6NCC3 632 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SYCE1LA8MT33 242 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MEI4A8MW99 385 aa7□□□□□ -1.29
VPS11-201ENST00000524454 GOLGA8NF8WBI6 632 aa7□□□□□ -1.29
VPS11-201ENST00000524454 NPC1O15118 1278 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MID1O15344 667 aa7□□□□□ -1.29
VPS11-201ENST00000524454 STX7O15400 261 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 SMAD6O43541 496 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 ZNF217O75362 1048 aa7□□□□□ -1.29
VPS11-201ENST00000524454 HAUS5O94927 633 aa7□□□□□ -1.29
VPS11-201ENST00000524454 POP4O95707 220 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 GOT2P00505 430 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 DNTTP04053 509 aa7□□□□□ -1.29
VPS11-201ENST00000524454 CFIP05156 583 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SERPINA6P08185 405 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SRCP12931 536 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ZNF37AP17032 561 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 PMLP29590 882 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ACSL1P33121 698 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ARSDP51689 593 aa7□□□□□ -1.29
VPS11-201ENST00000524454 EPHB1P54762 984 aa7□□□□□ -1.29
VPS11-201ENST00000524454 DCDC1P59894 354 aa7□□□□□ -1.29
VPS11-201ENST00000524454 IRX4P78413 519 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MPP1Q00013 466 aa7□□□□□ -1.29
VPS11-201ENST00000524454 CACNG1Q06432 222 aa7□□□□□ -1.29
VPS11-201ENST00000524454 RIPK1Q13546 671 aa7□□□□□ -1.29
VPS11-201ENST00000524454 RCN2Q14257 317 aa7□□□□□ -1.29
VPS11-201ENST00000524454 GALNT3Q14435 633 aa7□□□□□ -1.29
VPS11-201ENST00000524454 HNRNPA1L2Q32P51 320 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 TRIM61Q5EBN2 209 aa7□□□□□ -1.29
VPS11-201ENST00000524454 TECRLQ5HYJ1 363 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PPM1JQ5JR12 505 aa7□□□□□ -1.29
VPS11-201ENST00000524454 C9orf64Q5T6V5 341 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ZNF776Q68DI1 518 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 UGT3A1Q6NUS8 523 aa7□□□□□ -1.29
VPS11-201ENST00000524454 C22orf39Q6P5X5 142 aa7□□□□□ -1.29
VPS11-201ENST00000524454 LAYNQ6UX15 382 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SLC36A4Q6YBV0 504 aa7□□□□□ -1.29
VPS11-201ENST00000524454 Q6ZVU0 165 aa7□□□□□ -1.29
VPS11-201ENST00000524454 USP45Q70EL2 814 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ASRGL1Q7L266 308 aa7□□□□□ -1.29
VPS11-201ENST00000524454 C11orf74Q86VG3 221 aa7□□□□□ -1.29
VPS11-201ENST00000524454 C10orf107Q8IVU9 208 aa7□□□□□ -1.29
VPS11-201ENST00000524454 RGL4Q8IZJ4 473 aa7□□□□□ -1.29
VPS11-201ENST00000524454 FSTL5Q8N475 847 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 AFAP1L2Q8N4X5 818 aa7□□□□□ -1.29
VPS11-201ENST00000524454 LPCAT1Q8NF37 534 aa7□□□□□ -1.29
VPS11-201ENST00000524454 OR4K2Q8NGD2 314 aa7□□□□□ -1.29
VPS11-201ENST00000524454 FRS2Q8WU20 508 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PIH1D2Q8WWB5 315 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SNX19Q92543 992 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ERP27Q96DN0 273 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ITPKCQ96DU7 683 aa7□□□□□ -1.29
VPS11-201ENST00000524454 L3HYPDHQ96EM0 354 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SCRN2Q96FV2 425 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PDLIM5Q96HC4 596 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 CNDP1Q96KN2 507 aa7□□□□□ -1.29
VPS11-201ENST00000524454 TBATAQ96M53 351 aa7□□□□□ -1.29
VPS11-201ENST00000524454 RAB3IPQ96QF0 476 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 FAM129BQ96TA1 746 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MECRQ9BV79 373 aa7□□□□□ -1.29
VPS11-201ENST00000524454 EDEM2Q9BV94 578 aa7□□□□□ -1.29
VPS11-201ENST00000524454 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
VPS11-201ENST00000524454 TMEM120AQ9BXJ8 343 aa7□□□□□ -1.29
VPS11-201ENST00000524454 DERL2Q9GZP9 239 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MIR1-1HGQ9H1L0 117 aa7□□□□□ -1.29
VPS11-201ENST00000524454 CCDC68Q9H2F9 335 aa7□□□□□ -1.29
VPS11-201ENST00000524454 TNKS2Q9H2K2 1166 aa7□□□□□ -1.29
VPS11-201ENST00000524454 MMADHCQ9H3L0 296 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 TFB2MQ9H5Q4 396 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 C6orf106Q9H6K1 298 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
VPS11-201ENST00000524454 KCNK13Q9HB14 408 aa7□□□□□ -1.29
VPS11-201ENST00000524454 EML4Q9HC35 981 aaKnown RBP7□□□□□ -1.29
VPS11-201ENST00000524454 GPAMQ9HCL2 828 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PRM3Q9NNZ6 103 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ITM2CQ9NQX7 267 aa7□□□□□ -1.29
VPS11-201ENST00000524454 IGSF5Q9NSI5 407 aa7□□□□□ -1.29
VPS11-201ENST00000524454 WSB2Q9NYS7 404 aaPredicted RBP7□□□□□ -1.29
VPS11-201ENST00000524454 IL1RAPL1Q9NZN1 696 aa7□□□□□ -1.29
VPS11-201ENST00000524454 DKK3Q9UBP4 350 aa7□□□□□ -1.29
VPS11-201ENST00000524454 SUN2Q9UH99 717 aa7□□□□□ -1.29
VPS11-201ENST00000524454 ZFP69BQ9UJL9 534 aa7□□□□□ -1.29
VPS11-201ENST00000524454 PILRBQ9UKJ0 227 aa7□□□□□ -1.29
VPS11-201ENST00000524454 CDV3Q9UKY7 258 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms