RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	UGT3A2	Q3SY77	523 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZBED5	Q49AG3	693 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	AGK	Q53H12	422 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	FAM78A	Q5JUQ0	283 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	RBM20	Q5T481	1227 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	AFMID	Q63HM1	303 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	TANGO2	Q6ICL3	276 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF280D	Q6N043	979 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	RWDD4	Q6NW29	188 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ESRP1	Q6NXG1	681 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PRMT9	Q6P2P2	845 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	KLHL35	Q6PF15	583 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	KDELC1	Q6UW63	502 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	BEND5	Q7L4P6	421 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	GPRIN1	Q7Z2K8	1008 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF554	Q86TJ5	538 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CUZD1	Q86UP6	607 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	GPR180	Q86V85	440 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CROCCP3	Q8IVE0	287 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ADGRG5	Q8IZF4	528 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	AFAP1L2	Q8N4X5	818 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PAPD5	Q8NDF8	572 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PPHLN1	Q8NEY8	458 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	TNIP2	Q8NFZ5	429 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	FAM110B	Q8TC76	370 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	GRIN3A	Q8TCU5	1115 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ELSPBP1	Q96BH3	223 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ISOC1	Q96CN7	298 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	TCEAL4	Q96EI5	215 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ELMO2	Q96JJ3	720 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	FEM1C	Q96JP0	617 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC45A3	Q96JT2	553 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CNDP2	Q96KP4	475 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PPP1R2P1	Q96PQ5	205 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PLEKHG4B	Q96PX9	1271 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	NELL2	Q99435	816 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	OLFM1	Q99784	485 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRMO	Q9BU70	441 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	OSBPL6	Q9BZF3	934 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	PLA2G2F	Q9BZM2	168 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	MUC13	Q9H3R2	512 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CLK4	Q9HAZ1	481 aa	Known RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRPC7	Q9HCX4	862 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ATP13A1	Q9HD20	1204 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC52A3	Q9NQ40	469 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CRTAC1	Q9NQ79	661 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	AGPAT4	Q9NRZ5	378 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	OSER1	Q9NX31	292 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	ADA2	Q9NZK5	511 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	FBXO5	Q9UKT4	447 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	MTF2	Q9Y483	593 aa	Predicted RBP	7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	INSL5	Q9Y5Q6	135 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	SNX10	Q9Y5X0	201 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	DCHS1	Q96JQ0	3298 aa		7.76	□□□□□ -1.17
SPIDR-223	ENST00000524033	CHD5	Q8TDI0	1954 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TCRBV5S2	A0A599	114 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	NEMP2	A6NFY4	417 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	OR6C75	A6NL08	312 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	YJEFN3	A6XGL0	299 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	GOLGA8T	H3BQL2	631 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	NME4	O00746	187 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	UBFD1	O14562	309 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ACOX3	O15254	700 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	FZD6	O60353	706 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ANXA9	O76027	345 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	IPO13	O94829	963 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	LRIG2	O94898	1065 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	JCHAIN	P01591	159 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PDGFA	P04085	211 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	RBP1	P09455	135 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ALDOC	P09972	364 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	GLUL	P15104	373 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PAX3	P23760	479 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	DCK	P27707	260 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC26A3	P40879	764 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	CCR2	P41597	374 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	LEPR	P48357	1165 aa	Known RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC7A2	P52569	658 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ATXN3	P54252	364 aa	Predicted RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	CDH15	P55291	814 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	FOXM1	Q08050	763 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	DUSP4	Q13115	394 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	NME3	Q13232	169 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	MLF2	Q15773	248 aa	Predicted RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	FXN	Q16595	210 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	NRF1	Q16656	503 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PPP1R3A	Q16821	1122 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC36A3	Q495N2	470 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	UNC50	Q53HI1	259 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	COQ5	Q5HYK3	327 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PRSS36	Q5K4E3	855 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	OVOS1	Q6IE37	1185 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF852	Q6ZMS4	543 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	USP51	Q70EK9	711 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	PTAR1	Q7Z6K3	402 aa	Predicted RBP	7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	TAC4	Q86UU9	113 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC22A9	Q8IVM8	553 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	SIX6OS1	Q8N1H7	587 aa		7.75	□□□□□ -1.17
SPIDR-223	ENST00000524033	MYO1H	Q8N1T3	1032 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms