RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 NR1H4Q96RI1 486 aaPredicted RBP4.38□□□□□ -1.71
TVP23C-207ENST00000523573 PLEKHF1Q96S99 279 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 UPF3BQ9BZI7 483 aaKnown RBP4.38□□□□□ -1.71
TVP23C-207ENST00000523573 RETREG1Q9H6L5 497 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 CLK4Q9HAZ1 481 aaKnown RBP4.38□□□□□ -1.71
TVP23C-207ENST00000523573 BPIFA1Q9NP55 256 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 SMYD2Q9NRG4 433 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 CYSLTR2Q9NS75 346 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 CFAP45Q9UL16 551 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 MYH13Q9UKX3 1938 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 NSD2O96028 1365 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 CNTNAP1P78357 1384 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 TIAM2Q8IVF5 1701 aa4.38□□□□□ -1.71
TVP23C-207ENST00000523573 KDM6AO15550 1401 aaPredicted RBP4.38□□□□□ -1.71
TVP23C-207ENST00000523573 KCPQ6ZWJ8 1503 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 A0A1W2PQM1 296 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 VPS37CA5D8V6 355 aaPredicted RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 LRRC53A6NM62 1247 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 GOLGA8KD6RF30 607 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 IFNL4K9M1U5 179 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 SNAP23O00161 211 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 SLC16A5O15375 505 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 KRT36O76013 467 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 ETFAP13804 333 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 GABRB2P47870 512 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 AMPHP49418 695 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CCNHP51946 323 aaPredicted RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 GNG11P61952 73 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 ADORA2A-AS1P86434 159 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 EEF1A2Q05639 463 aaKnown RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CTTNQ14247 550 aaKnown RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 SNCBQ16143 134 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 GSTA3Q16772 222 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 ATL3Q6DD88 541 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CREB3L2Q70SY1 520 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CPLX4Q7Z7G2 160 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 SDCCAG8Q86SQ7 713 aaPredicted RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 NOXA1Q86UR1 476 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 APLFQ8IW19 511 aaPredicted RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 DIS3L2Q8IYB7 885 aaKnown RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 OR14A16Q8NHC5 309 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 KCNG4Q8TDN1 519 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 TRIB2Q92519 343 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 FBXL8Q96CD0 374 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 ZNF570Q96NI8 536 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CRACR2AQ9BSW2 395 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 C1QTNF4Q9BXJ3 329 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CAPS2Q9BXY5 557 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 ZHX3Q9H4I2 956 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 OR6C3Q9NZP0 311 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 PPP2R2CQ9Y2T4 447 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 LSM4Q9Y4Z0 139 aaKnown RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 RPS6KL1Q9Y6S9 549 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 SCINQ9Y6U3 715 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 EVC2Q86UK5 1308 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 CDHR2Q9BYE9 1310 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 KDM3AQ9Y4C1 1321 aa4.37□□□□□ -1.71
TVP23C-207ENST00000523573 N4BP2Q86UW6 1770 aaPredicted RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 MAP2P11137 1827 aaKnown RBP4.37□□□□□ -1.71
TVP23C-207ENST00000523573 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 C4AP0C0L4 1744 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 TOGARAM1Q9Y4F4 1720 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 A0A1B0GVM2 712 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 PLSCR5A0PG75 271 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 PRR23AA6NEV1 266 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 NPIPB11E5RHQ5 1161 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 LIN7AO14910 233 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 AHCYL1O43865 530 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 KLK8O60259 260 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 STX10O60499 249 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 N4BP1O75113 896 aaKnown RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 SOX30O94993 753 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 ZBTB11O95625 1053 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 SP1P08047 785 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 SPARCP09486 303 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 KRTAP10-3P60369 221 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 ACTN3Q08043 901 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 DSC1Q08554 894 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 DCTN2Q13561 401 aaKnown RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 PDIA5Q14554 519 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 WHAMMP3Q1A5X7 153 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 TCTN1Q2MV58 587 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 TYW3Q6IPR3 259 aaKnown RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 CDC73Q6P1J9 531 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 CCDC73Q6ZRK6 1079 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 C11orf57Q6ZUT1 292 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 RUFY3Q7L099 469 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 MFN1Q8IWA4 741 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 CCDC83Q8IWF9 413 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 ARRDC2Q8TBH0 407 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 CCDC12Q8WUD4 166 aaPredicted RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 SNAPC3Q92966 411 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 PABPC5Q96DU9 382 aaKnown RBP4.36□□□□□ -1.71
TVP23C-207ENST00000523573 C7orf26Q96N11 449 aa4.36□□□□□ -1.71
TVP23C-207ENST00000523573 PIP5K1AQ99755 562 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms