RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ZNF234Q14588 700 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 HNRNPA1L2Q32P51 320 aaKnown RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 LIPIQ6XZB0 460 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 FRA10AC1Q70Z53 315 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 LARP4Q71RC2 724 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■□□□ 12.6
SREK1-212ENST00000522912 TECPR1Q7Z6L1 1165 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 SNX32Q86XE0 403 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 TERB1Q8NA31 727 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 DLG3Q92796 817 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 C19orf60Q96EN9 201 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 MYADMQ96S97 322 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 RTKNQ9BST9 563 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 RIOK2Q9BVS4 552 aaKnown RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 TUBB1Q9H4B7 451 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 SMOXQ9NWM0 555 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ITM2BQ9Y287 266 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 EDDM13A0A1B0GTR0 161 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ATP6AP2A0A1C7CYW4 349 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 SPINT1O43278 529 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 PEX11AO75192 247 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ENTPD5O75356 428 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ATP6AP2O75787 350 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 THRAP10827 490 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ITGAXP20702 1163 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 NFKBIAP25963 317 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 CCR7P32248 378 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 NAA20P61599 178 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 CUL3Q13618 768 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 EIF4HQ15056 248 aaKnown RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 HENMT1Q5T8I9 393 aaKnown RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 DET1Q7L5Y6 550 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 SYVN1Q86TM6 617 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 SCUBE1Q8IWY4 988 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ARHGAP24Q8N264 748 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 TWIST2Q8WVJ9 160 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 WDR60Q8WVS4 1066 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ARRDC3Q96B67 414 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 PANX3Q96QZ0 392 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 GDF15Q99988 308 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 HGH1Q9BTY7 390 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 FAM126AQ9BYI3 521 aaPredicted RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 KCTD5Q9NXV2 234 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 NFKBIL1Q9UBC1 381 aaPredicted RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 A0A088AWK7 358 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 FADS2P1A8MWK0 482 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 PIP5K1BO14986 540 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 FFAR2O15552 330 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 MTX2O75431 263 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 PRNPP04156 253 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 ATP1B2P14415 290 aaPredicted RBP16.59■□□□□ 0.25
SREK1-212ENST00000522912 RUNX3Q13761 415 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 PHKG1Q16816 387 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 KHDC1Q4VXA5 237 aaKnown RBP16.59■□□□□ 0.25
SREK1-212ENST00000522912 ULK2Q8IYT8 1036 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 PDPRQ8NCN5 879 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 HMGCLL1Q8TB92 370 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 CHFRQ96EP1 664 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 FAM129BQ96TA1 746 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 TMEM245Q9H330 911 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 CD248Q9HCU0 757 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 KLHL42Q9P2K6 505 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 HCN2Q9UL51 889 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 PPM1HQ9ULR3 514 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 OARD1Q9Y530 152 aa16.59■□□□□ 0.25
SREK1-212ENST00000522912 UBDO15205 165 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 RAD51BO15315 384 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 TAPBPO15533 448 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 MLYCDO95822 493 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 OR56A5P0C7T3 313 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 AOAHP28039 575 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 GJA4P35212 333 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 KPNB1Q14974 876 aaKnown RBP16.58■□□□□ 0.25
SREK1-212ENST00000522912 HERC3Q15034 1050 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 PCBP2Q15366 365 aaKnown RBP eCLIP16.58■□□□□ 0.25
SREK1-212ENST00000522912 RBBP7Q16576 425 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 TTLL9Q3SXZ7 439 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 SERPINA13PQ6UXR4 307 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 CPA6Q8N4T0 437 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 TRAM1L1Q8N609 369 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 TMIEQ8NEW7 156 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 OR56A4Q8NGH8 313 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 RP9Q8TA86 221 aaKnown RBP16.58■□□□□ 0.25
SREK1-212ENST00000522912 PIP4K2CQ8TBX8 421 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 MAGEC3Q8TD91 643 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 DTX3LQ8TDB6 740 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.25
SREK1-212ENST00000522912 AKTIPQ9H8T0 292 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 FBRSL1Q9HCM7 1045 aaKnown RBP16.58■□□□□ 0.25
SREK1-212ENST00000522912 PTBP2Q9UKA9 531 aaKnown RBP16.58■□□□□ 0.25
SREK1-212ENST00000522912 TIMM22Q9Y584 194 aa16.58■□□□□ 0.25
SREK1-212ENST00000522912 TBC1D3BA6NDS4 549 aa16.58■□□□□ 0.24
SREK1-212ENST00000522912 SGTAO43765 313 aa16.58■□□□□ 0.24
SREK1-212ENST00000522912 ESRRBO95718 433 aa16.58■□□□□ 0.24
SREK1-212ENST00000522912 GUCA1CO95843 209 aa16.58■□□□□ 0.24
SREK1-212ENST00000522912 ELFN1P0C7U0 828 aa16.58■□□□□ 0.24
SREK1-212ENST00000522912 CBSLP0DN79 551 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms