RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 QKIQ96PU8 341 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 VPS35Q96QK1 796 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 OR6C1Q96RD1 312 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 VAT1Q99536 393 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 TIMM29Q9BSF4 260 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 SLC12A9Q9BXP2 914 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 EPB41L1Q9H4G0 881 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 OGFRQ9NZT2 677 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 IL17CQ9P0M4 197 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 PILRAQ9UKJ1 303 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 TRHDEQ9UKU6 1024 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 WDR37Q9Y2I8 494 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 KCTD3Q9Y597 815 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 ARL5AQ9Y689 179 aa10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 CFAP20Q9Y6A4 193 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-235ENST00000522730 SDK2Q58EX2 2172 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 MYO18BQ8IUG5 2567 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 C2orf81A6NN90 581 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 KCNN4O15554 427 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 KATNA1O75449 491 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ANXA9O76027 345 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 STK10O94804 968 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 LCA5LO95447 670 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 POLBP06746 335 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 HLA-DPA1P20036 260 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 MSH3P20585 1137 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 MAP4P27816 1152 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 CTSCP53634 463 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 GEMP55040 296 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 HADHBP55084 474 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 EIF3EP60228 445 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 CCZ1BP86790 482 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 OTUD4Q01804 1114 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 MPP3Q13368 585 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 SPARCL1Q14515 664 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 PRPSAP1Q14558 356 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 PLCL1Q15111 1095 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 LDLRAP1Q5SW96 308 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 GPRC6AQ5T6X5 926 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ZDHHC20Q5W0Z9 365 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 AADACL2Q6P093 401 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 BORAQ6PGQ7 559 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ABRAXAS1Q6UWZ7 409 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 FAM83HQ6ZRV2 1179 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 PTRH1Q86Y79 214 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 TMTC1Q8IUR5 882 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ACTL9Q8TC94 416 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 RSC1A1Q92681 617 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 TEFMQ96QE5 360 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ZPBPQ9BS86 351 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 OSBPL8Q9BZF1 889 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ULBP3Q9BZM4 244 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ZCCHC2Q9C0B9 1178 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 FAM96AQ9H5X1 160 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 SLC40A1Q9NP59 571 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 HACD3Q9P035 362 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 NFKBIL1Q9UBC1 381 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 IL17BQ9UHF5 180 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 PCDHA3Q9Y5H8 950 aa10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 ZFC3H1O60293 1989 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-235ENST00000522730 LILRA5A6NI73 299 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ZNF891A8MT65 544 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 NRDCO43847 1150 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 NDUFA10O95299 355 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 APOC2P02655 101 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 SFTPCP11686 197 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ZNF28P17035 718 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 LPOP22079 712 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 PSMB4P28070 264 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 CETN2P41208 172 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 CCR10P46092 362 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ARL4DP49703 201 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 PPP1CAP62136 330 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 KCNC4Q03721 635 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 XRCC4Q13426 336 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 NFE2L1Q14494 772 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 KRT33BQ14525 404 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 RPE65Q16518 533 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ANKRD20A2Q5SQ80 823 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ANKRD20A1Q5TYW2 823 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 AGAP9Q5VTM2 703 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 ITPRIPL1Q6GPH6 555 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 C11orf96Q7Z7L8 435 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 KIAA1328Q86T90 577 aa10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 CDKL3Q8IVW4 592 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 TAB3Q8N5C8 712 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-235ENST00000522730 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms