RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SLC30A5Q8TAD4 765 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SLC37A2Q8TED4 501 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SSC4DQ8WTU2 575 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 PATE1Q8WXA2 126 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SEC14L1Q92503 715 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 RTP4Q96DX8 246 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 DTD2Q96FN9 168 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 RHOVQ96L33 236 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 EIF3CQ99613 913 aaKnown RBP6.18□□□□□ -1.42
PABPC1-220ENST00000522658 HERPUD2Q9BSE4 406 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 LGR4Q9BXB1 951 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 STK33Q9BYT3 514 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 TWSG1Q9GZX9 223 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 OSGEPL1Q9H4B0 414 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 EPB41L1Q9H4G0 881 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 DHX35Q9H5Z1 703 aaKnown RBP6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SIX2Q9NPC8 291 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 OCIAD1Q9NX40 245 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 PLEKHB1Q9UF11 243 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-220ENST00000522658 LNPEPQ9UIQ6 1025 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 PILRAQ9UKJ1 303 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 FZD10Q9ULW2 581 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 PHTF1Q9UMS5 762 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 TTLL3Q9Y4R7 772 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 ANKRD36A6QL64 1941 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 LRP4O75096 1905 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 ZFC3H1O60293 1989 aaKnown RBP6.18□□□□□ -1.42
PABPC1-220ENST00000522658 DOCK4Q8N1I0 1966 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 SCN8AQ9UQD0 1980 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 BOD1L1Q8NFC6 3051 aa6.18□□□□□ -1.42
PABPC1-220ENST00000522658 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 LOC101059948A0A1B0GTJ6 334 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 J3KR12 359 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 BUB1BO60566 1050 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 PF4P02776 101 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 MT-ND3P03897 115 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 AMD1P17707 334 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 PSMA2P25787 234 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 SERPINB6P35237 376 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 SOX5P35711 763 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 STAT5AP42229 794 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 FASLGP48023 281 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 PAPOLAP51003 745 aaKnown RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 PGDP52209 483 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF135P52742 658 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 MLLT10P55197 1068 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 POLR2FP61218 127 aaKnown RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 PDE1BQ01064 536 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 MC2RQ01718 297 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 IL10RBQ08334 325 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 RALGDSQ12967 914 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 ERV3-1Q14264 604 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 CNGA3Q16281 694 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 AFMIDQ63HM1 303 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 KCTD16Q68DU8 428 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 TCTN3Q6NUS6 607 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 WDR74Q6RFH5 385 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 C6orf15Q6UXA7 325 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 SFTPA2Q8IWL1 248 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 NAGSQ8N159 534 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 NEK11Q8NG66 645 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 SLC20A1Q8WUM9 679 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 MIB2Q96AX9 1013 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 AP2M1Q96CW1 435 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 CNPY3Q9BT09 278 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 TEX101Q9BY14 249 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 FRMD8Q9BZ67 464 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 KLC2Q9H0B6 622 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 VPS16Q9H269 839 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 SARS2Q9NP81 518 aaKnown RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 NLRC4Q9NPP4 1024 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 FAM207AQ9NSI2 230 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 TMEM9Q9P0T7 183 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 ZNHIT2Q9UHR6 403 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 CROTQ9UKG9 612 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 CNOT6Q9ULM6 557 aaKnown RBP6.17□□□□□ -1.42
PABPC1-220ENST00000522658 NEU3Q9UQ49 428 aa6.17□□□□□ -1.42
PABPC1-220ENST00000522658 DOPEY2Q9Y3R5 2298 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 KIR2DS5A0A0G2JLQ3 304 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 A0A0G2JNG1 304 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 A1L4Q6 167 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PIPSLA2A3N6 862 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ANKRD33BA6NCL7 494 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 SIGLEC16A6NMB1 481 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 OR5K4A6NMS3 321 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PDZK1P1A8MUH7 402 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 KIR2DS3K7RE56 304 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 PPM1DO15297 605 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 KIAA0754O94854 1291 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 HTR3BO95264 441 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 NDUFA10O95299 355 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 BPNT1O95861 308 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 VIPP01282 170 aa6.16□□□□□ -1.42
PABPC1-220ENST00000522658 CYP1A1P04798 512 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-220ENST00000522658 ACP5P13686 325 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms