RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 ERVK-21P61565 698 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 GTF2BQ00403 316 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CYP24A1Q07973 514 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CSTF3Q12996 717 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ANKRD34AQ69YU3 496 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 C15orf39Q6ZRI6 1047 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 GPAT4Q86UL3 456 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 STK32CQ86UX6 486 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 KIF18BQ86Y91 864 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 PM20D2Q8IYS1 436 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 PJA1Q8NG27 643 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 FATE1Q969F0 183 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 TMCO6Q96DC7 493 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 HOPXQ9BPY8 73 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CCDC32Q9BV29 185 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 TRIM8Q9BZR9 551 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SMURF2Q9HAU4 748 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 PTPRHQ9HD43 1115 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ADAM28Q9UKQ2 775 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 STAP1Q9ULZ2 295 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CSNK1G3Q9Y6M4 447 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 POLRMTO00411 1230 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 NFIBO00712 420 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 HPRP00739 348 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 DNTTP04053 509 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ITGB3P05106 788 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SREBF1P36956 1147 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 FCGRTP55899 365 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 IKZF1Q13422 519 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SMAD4Q13485 552 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 TFDP2Q14188 446 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SETMARQ53H47 684 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 FBLIM1Q8WUP2 373 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 AKAP1Q92667 903 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 TBATAQ96M53 351 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 KLHL15Q96M94 604 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 RPRD1AQ96P16 312 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 ACOX2Q99424 681 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SEPHS2Q99611 448 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 APOL4Q9BPW4 351 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SDHAF3Q9NRP4 125 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 CCDC59Q9P031 241 aaKnown RBP11.91□□□□□ -0.5
SPIDR-217ENST00000522117 GTF2IRD1Q9UHL9 959 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 SNX8Q9Y5X2 465 aa11.91□□□□□ -0.5
SPIDR-217ENST00000522117 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 SLC12A8A0AV02 714 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 NCAM2O15394 837 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PGLSO95336 258 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 MT-ND2P03891 347 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 HMGN1P05114 100 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 MPOP05164 745 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ALPPP05187 535 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 UMPSP11172 480 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PCSK2P16519 638 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ITGALP20701 1170 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 SLC6A2P23975 617 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PTX3P26022 381 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 HTR7P34969 479 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 GABPAQ06546 454 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 GRM1Q13255 1194 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 KCNAB2Q13303 367 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 GRM7Q14831 915 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 QRICH1Q2TAL8 776 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ZNF691Q5VV52 312 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CASC4Q6P4E1 433 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CFAP77Q6ZQR2 320 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 MINDY1Q8N5J2 469 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 TXNDC5Q8NBS9 432 aaKnown RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ZNF555Q8NEP9 628 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ZNF606Q8WXB4 792 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 REPS1Q96D71 796 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RDH12Q96NR8 316 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RBBP8Q99708 897 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CEP41Q9BYV8 373 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CYP3A43Q9HB55 503 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 IFT46Q9NQC8 304 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 BFARQ9NZS9 450 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 FNIP2Q9P278 1114 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 MRPS7Q9Y2R9 242 aaKnown RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 HSPB11Q9Y547 144 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PCDHA1Q9Y5I3 950 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 V9GYQ6 96 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 A0A1W2PRG6 482 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RGS5O15539 181 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CABYRO75952 493 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms