RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CXCL10P02778 98 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GHRP10912 638 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FCGR2AP12318 317 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CYP4B1P13584 511 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CSF2RAP15509 400 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 PTMSP20962 102 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ABCD1P33897 745 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SKIV2L2P42285 1042 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CCT5P48643 541 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 AARSP49588 968 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 EFNA5P52803 228 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ART1P52961 327 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GAS1P54826 345 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CDH12P55289 794 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ASIC1P78348 528 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 MBTD1Q05BQ5 628 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 NCBP1Q09161 790 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 COASYQ13057 564 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 DMP1Q13316 513 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CUL4BQ13620 913 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ALCAMQ13740 583 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CAPSQ13938 189 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 POSTNQ15063 836 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SHBQ15464 509 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 MAPK6Q16659 721 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TIGD6Q17RP2 521 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GALNTL6Q49A17 601 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TDRD12Q587J7 1177 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 HERC4Q5GLZ8 1057 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FBXO47Q5MNV8 452 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TANGO2Q6ICL3 276 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 C8orf82Q6P1X6 216 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 KIAA1324Q6UXG2 1013 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FAM83HQ6ZRV2 1179 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 STXBP4Q6ZWJ1 553 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ZNF367Q7RTV3 350 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ZNF720Q7Z2F6 126 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GALNT7Q86SF2 657 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SFR1Q86XK3 245 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ZBTB8OSQ8IWT0 167 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 VPS52Q8N1B4 723 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 HORMAD2Q8N7B1 307 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM161BQ8NDZ6 487 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 DBF4BQ8NFT6 615 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 OR6Y1Q8NGX8 325 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM163Q8TC26 289 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FAR1Q8WVX9 515 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SEPT8Q92599 483 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GOLGA1Q92805 767 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 APBB2Q92870 758 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC47Q96A33 483 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TEFMQ96QE5 360 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FIZ1Q96SL8 496 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 POLDIP3Q9BY77 421 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FRMD8Q9BZ67 464 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 BLZF1Q9H2G9 400 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FZD8Q9H461 694 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ST6GALNAC4Q9H4F1 302 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 ZHX3Q9H4I2 956 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 MINDY3Q9H8M7 445 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 OLFML3Q9NRN5 406 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SLC22A11Q9NSA0 550 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 PANK4Q9NVE7 773 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 KIF17Q9P2E2 1029 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 LARSQ9P2J5 1176 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SEL1LQ9UBV2 794 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CDH22Q9UJ99 828 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 DHDHQ9UQ10 334 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 GINS2Q9Y248 185 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 LZTS1Q9Y250 596 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 DGKBQ9Y6T7 804 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 PHLPP2Q6ZVD8 1323 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 DOCK3Q8IZD9 2030 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 A0A1B0GUA9 196 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 DENND3A2RUS2 1198 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 NPIPB13A6NJU9 1138 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 NPIPB5A8MRT5 1133 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 NPIPB4C9JG80 1138 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SYN3O14994 580 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 KLRC4O43908 158 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CSDE1O75534 798 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 BAIAP3O94812 1187 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ERLIN2O94905 339 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 MBD3O95983 291 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PIGRP01833 764 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 RPN1P04843 607 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 DHRS4L1P0CG22 281 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ACTN1P12814 892 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TNNT1P13805 278 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 HSD3B1P14060 373 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PLA2G2AP14555 144 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CHN1P15882 459 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 MT3P25713 68 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CASP1P29466 404 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TYK2P29597 1187 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 NMT1P30419 496 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 AXLP30530 894 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CD52P31358 61 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 RFC1P35251 1148 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms