RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 TMEM220Q6QAJ8 160 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 WDR74Q6RFH5 385 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 LRRC6Q86X45 466 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TRAPPC5Q8IUR0 188 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CCNJLQ8IV13 435 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SLITRK4Q8IW52 837 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TAB3Q8N5C8 712 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 HM13Q8TCT9 377 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 MAPK15Q8TD08 544 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TMEM159Q96B96 161 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 LIN37Q96GY3 246 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 DEPDC7Q96QD5 511 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 B3GNT4Q9C0J1 378 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 RAB33BQ9H082 229 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 P2RY12Q9H244 342 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 ARFGAP3Q9NP61 516 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SYBUQ9NX95 663 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SEMA5BQ9P283 1151 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 MOSPD1Q9UJG1 213 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 KCNK6Q9Y257 313 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 PRKAB1Q9Y478 270 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 APC2O95996 2303 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 ZFC3H1O60293 1989 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 IGHV1OR21-1A0A087WYE8 117 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 E7ESA3 106 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CCL22O00626 93 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 USP1O94782 785 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CPNE6O95741 557 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 MYF5P13349 255 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 OGNP20774 298 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 MGAT1P26572 445 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CD1CP29017 333 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CASQ1P31415 396 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 PPARGP37231 505 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 SLC19A1P41440 591 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 TTPAP49638 278 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 MAZP56270 477 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 EIF3IQ13347 325 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 PPP1R7Q15435 360 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 INSCQ1MX18 579 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 RBM44Q6ZP01 1051 aaKnown RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 GALNT7Q86SF2 657 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 SLC9B2Q86UD5 537 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 C17orf53Q8N3J3 647 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 GDAP1Q8TB36 358 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 PATE1Q8WXA2 126 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■■■ 62.8
SPIDR-212ENST00000519661 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 TTC1Q99614 292 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CCM2Q9BSQ5 444 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 LRRN3Q9H3W5 708 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 SLC40A1Q9NP59 571 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CPNE7Q9UBL6 633 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 EPHA6Q9UF33 1036 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 PCDHGA8Q9Y5G5 932 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 MN1Q10571 1320 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 ANKRD11Q6UB99 2663 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-212ENST00000519661 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
SPIDR-212ENST00000519661 CPED1A4D0V7 1026 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 F8W8V4 182 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 LIN7AO14910 233 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-212ENST00000519661 AVILO75366 819 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 TTC4O95801 387 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 PROS1P07225 676 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 NMBRP28336 390 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 AKT1P31749 480 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 LSSP48449 732 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 VPS41P49754 854 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 PRAMEP78395 509 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 CRADDP78560 199 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 TMPRSS15P98073 1019 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 HHEXQ03014 270 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 TARDBPQ13148 414 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIDR-212ENST00000519661 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 ANKRD20A4Q4UJ75 823 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 ZRANB3Q5FWF4 1079 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
SPIDR-212ENST00000519661 RNF187Q5TA31 235 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms