RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 DDHD1Q8NEL9 900 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 KIAA1143Q96AT1 154 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-205ENST00000519623 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
CSMD1-205ENST00000519623 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 EFHD1Q9BUP0 239 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 SEMA5BQ9P283 1151 aa12.2□□□□□ -0.46
CSMD1-205ENST00000519623 RCCD1A6NED2 376 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 APOC4-APOC2K7ER74 178 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 APOC2P02655 101 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 FGF5P12034 268 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 FECHP22830 423 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 OAS2P29728 719 aaKnown RBP12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ADRA1AP35348 466 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 CCR10P46092 362 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 CAPZBP47756 277 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 CSRP3P50461 194 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 POLE2P56282 527 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 COPS2P61201 443 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 KCNAB2Q13303 367 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 MSLNQ13421 630 aaPredicted RBP12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 IL11RAQ14626 422 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 RPE65Q16518 533 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 CRTC2Q53ET0 693 aaPredicted RBP12.19□□□□□ -0.46
CSMD1-205ENST00000519623 CACHD1Q5VU97 1274 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 METRNLQ641Q3 311 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ESX1Q8N693 406 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ZNF398Q8TD17 642 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 RNF31Q96EP0 1072 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ZDHHC12Q96GR4 267 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 OR6C1Q96RD1 312 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 TRIM4Q9C037 500 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 TUBD1Q9UJT1 453 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 PSMD13Q9UNM6 376 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSMD1-205ENST00000519623 PKP3Q9Y446 797 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 KCTD3Q9Y597 815 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 ARL5AQ9Y689 179 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 RPS6KL1Q9Y6S9 549 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 DUSP10Q9Y6W6 482 aa12.19□□□□□ -0.46
CSMD1-205ENST00000519623 UBR5O95071 2799 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 IGHV5-51A0A0C4DH38 117 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 OR2AG2A6NM03 316 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 H7C0C1 242 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 STX7O15400 261 aaKnown RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 RASSF9O75901 435 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 NELFEP18615 380 aaKnown RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 LPOP22079 712 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 HALP42357 657 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 ATP5OP48047 213 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 GEMP55040 296 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 PPP1CAP62136 330 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 CDC20Q12834 499 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 NFE2L1Q14494 772 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 SPA17Q15506 151 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 IRGCQ6NXR0 463 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 C6orf15Q6UXA7 325 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 BEND7Q8N7W2 519 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 GALNT6Q8NCL4 622 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 STARD8Q92502 1023 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 FICDQ9BVA6 458 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 ULBP3Q9BZM4 244 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 ZCCHC2Q9C0B9 1178 aaKnown RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 GBA3Q9H227 469 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 SMOXQ9NWM0 555 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-205ENST00000519623 NBASA2RRP1 2371 aa12.18□□□□□ -0.46
CSMD1-205ENST00000519623 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 AGAP14A8MT82 685 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 SGTAO43765 313 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 SPAG6O75602 509 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 ANXA9O76027 345 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 NDUFA10O95299 355 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 TCN2P20062 427 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 MSH3P20585 1137 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 XIAPP98170 497 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 MC1RQ01726 317 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 OLIG2Q13516 323 aa12.17□□□□□ -0.46
CSMD1-205ENST00000519623 TAF1AQ15573 450 aaPredicted RBP12.17□□□□□ -0.46
CSMD1-205ENST00000519623 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms