RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 SYN3O14994 580 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 AREL1O15033 823 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZSCAN9O15535 394 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 BUB3O43684 328 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 EDIL3O43854 480 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 KLRC4O43908 158 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TSPAN1O60635 241 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 HUS1O60921 280 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TADA2AO75478 443 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 STBD1O95210 358 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 FGF19O95750 216 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CHRNA1P02708 482 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CXCL10P02778 98 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 HRGP04196 525 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 RB1P06400 928 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 DLATP10515 647 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 ODC1P11926 461 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 HARSP12081 509 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 KCNE1P15382 129 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CHRNB2P17787 502 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ARF4P18085 180 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 RPL17P18621 184 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 CD52P31358 61 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ELF1P32519 619 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 PIK3CAP42336 1068 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 GLIPR1P48060 266 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TAF6P49848 677 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CYP2J2P51589 502 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CCL23P55773 120 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TUBA1BP68363 451 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 KRT83P78385 493 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TFAMQ00059 246 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 TSPY1Q01534 308 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 GCNT1Q02742 428 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 UBXN1Q04323 297 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 UBE3AQ05086 875 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CYP24A1Q07973 514 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 MGAT3Q09327 533 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CCDC173Q0VFZ6 552 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TRAF3Q13114 568 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 PLD1Q13393 1074 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ATP1A4Q13733 1029 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 BTG3Q14201 252 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 SMC1AQ14683 1233 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 LPIN1Q14693 890 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 VEPH1Q14D04 833 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 PSMD6Q15008 389 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SPA17Q15506 151 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TAF12Q16514 161 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 NFE2Q16621 373 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZNF699Q32M78 642 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 DPCR1Q3MIW9 517 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZNF667Q5HYK9 610 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 C10orf76Q5T2E6 689 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 FAXCQ5TGI0 409 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SPECC1LQ69YQ0 1117 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ANKRD40Q6AI12 368 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CXorf57Q6NSI4 855 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 MRNIPQ6NTE8 343 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 DCLRE1AQ6PJP8 1040 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SARM1Q6SZW1 724 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 C16orf89Q6UX73 402 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 C4orf50Q6ZRC1 276 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 Q6ZSV7 163 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZNF367Q7RTV3 350 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 DEFB128Q7Z7B8 93 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 UNC93AQ86WB7 457 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZNF677Q86XU0 584 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ECHDC2Q86YB7 292 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 BRSK2Q8IWQ3 736 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 GPR65Q8IYL9 337 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 THNSL1Q8IYQ7 743 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ELMOD1Q8N336 334 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ARHGAP18Q8N392 663 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SLC25A41Q8N5S1 370 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 C2orf15Q8WU43 125 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 FAM216AQ8WUB2 273 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SCFD1Q8WVM8 642 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TRAPPC12Q8WVT3 735 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 HERVK_113Q902F9 699 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 STAMQ92783 540 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 GOLGA1Q92805 767 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TOP1MTQ969P6 601 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 EXOC4Q96A65 974 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CCDC127Q96BQ5 260 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CNOT6LQ96LI5 555 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 CEP295NLQ96MC4 621 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ZNF558Q96NG5 402 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 CDCA3Q99618 268 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 RAD9AQ99638 391 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 NCAPGQ9BPX3 1015 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 NUDT22Q9BRQ3 303 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 STRA6Q9BX79 667 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 C1QTNF5Q9BXJ0 243 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 BRINP2Q9C0B6 783 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 TMEM117Q9H0C3 514 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 LMAN2LQ9H0V9 348 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SNX25Q9H3E2 840 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 NDST4Q9H3R1 872 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 PDZD7Q9H5P4 517 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms