RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 RTN2O75298 545 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 WBP4O75554 376 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TMEM63AO94886 807 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ERLIN2O94905 339 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 GOSR1O95249 250 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ATP5BP06576 529 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 HEXAP06865 529 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TUBBP07437 444 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZFYP08048 801 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PCP11498 1178 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SKILP12757 684 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ARSBP15848 533 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZNF12P17014 697 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZNF3P17036 446 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TMEM11P17152 192 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TCF7P36402 384 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 NUP62P37198 522 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 CCT6AP40227 531 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 NNMTP40261 264 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 CDKN2AP42771 156 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MTHFRP42898 656 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ATP5OP48047 213 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PIP4K2AP48426 406 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PEX5P50542 639 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RARSP54136 660 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 F2RL1P55085 397 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SLC26A5P58743 744 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ARPC4P59998 168 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 NANOS2P60321 138 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 IL1RL1Q01638 556 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DR1Q01658 176 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MECOMQ03112 1051 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RELQ04864 619 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SCN1BQ07699 218 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 AIMP1Q12904 312 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DNAJC3Q13217 504 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ITGADQ13349 1161 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RIPK1Q13546 671 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DHX34Q14147 1143 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ERV3-1Q14264 604 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SQLEQ14534 574 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MXD4Q14582 209 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SNCBQ16143 134 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MEA1Q16626 185 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TPD52L1Q16890 204 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SLC39A12Q504Y0 691 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZNF585BQ52M93 769 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 FBXO48Q5FWF7 155 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 CXorf66Q5JRM2 361 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 KRBOX4Q5JUW0 171 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 C1orf141Q5JVX7 400 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 LRIF1Q5T3J3 769 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 AADACL4Q5VUY2 407 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ETFRF1Q6IPR1 90 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 KRT80Q6KB66 452 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PLBD1Q6P4A8 553 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 WDR73Q6P4I2 378 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ERICH5Q6P6B1 374 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 FIP1L1Q6UN15 594 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MON1BQ7L1V2 547 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MIER3Q7Z3K6 550 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PXKQ7Z7A4 578 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MRPL10Q7Z7H8 261 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SLFN11Q7Z7L1 901 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZER1Q7Z7L7 766 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 KIAA1328Q86T90 577 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PALB2Q86YC2 1186 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 THNSL1Q8IYQ7 743 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RBFAQ8N0V3 343 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 HDDC3Q8N4P3 179 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TTC39CQ8N584 583 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 NGEFQ8N5V2 710 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ARFGAP2Q8N6H7 521 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DNAAF3Q8N9W5 541 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZNF540Q8NDQ6 660 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MCPH1Q8NEM0 835 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MOSPD2Q8NHP6 518 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 B4GALNT2Q8NHY0 566 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 HUS1BQ8NHY5 278 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DUSP19Q8WTR2 217 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SLC35F5Q8WV83 523 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 PSPC1Q8WXF1 523 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 DNAAF4Q8WXU2 420 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 SEPT8Q92599 483 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 GTF3C6Q969F1 213 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 FAM162AQ96A26 154 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MIB2Q96AX9 1013 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 INTS12Q96CB8 462 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RHBDF1Q96CC6 855 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RNF183Q96D59 192 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 MMABQ96EY8 250 aaPredicted RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 ZNF479Q96JC4 524 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RPGRIP1Q96KN7 1286 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RBM14Q96PK6 669 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 RUFY1Q96T51 708 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 GAD1Q99259 594 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 TXN2Q99757 166 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 API5Q9BZZ5 524 aaKnown RBP1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 KRT23Q9C075 422 aa1.89□□□□□ -2.11
TVP23C-CDRT4-202ENST00000518506 NACA2Q9H009 215 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms