RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 RAB43Q86YS6 212 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 DSELQ8IZU8 1212 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 CISD2Q8N5K1 135 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 TM9SF4Q92544 642 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF501Q96CX3 271 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 TRIM11Q96F44 468 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 MAP3K3Q99759 626 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 RBM22Q9NW64 420 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAPPC9-203ENST00000517667 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.62
TRAPPC9-203ENST00000517667 CROCCQ5TZA2 2017 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 MEN1O00255 615 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 MFSD11O43934 449 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 KRT38O76015 456 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 IPO13O94829 963 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 IGHEP01854 428 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 MYBL1P10243 752 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 GZMAP12544 262 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 CCNCP24863 283 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 UBXN1Q04323 297 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 GTF2H3Q13889 308 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 KRT81Q14533 505 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 NFKBIBQ15653 356 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 GPR19Q15760 415 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 CCDC122Q5T0U0 273 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 ALS2CLQ60I27 953 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 IGFL3Q6UXB1 125 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 TRAPPC5Q8IUR0 188 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 SLC38A9Q8NBW4 561 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 ST6GALNAC3Q8NDV1 305 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 GPR26Q8NDV2 337 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 UBE2Q2Q8WVN8 375 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 CLIP3Q96DZ5 547 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 VPS35Q96QK1 796 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 BARD1Q99728 777 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 DPH2Q9BQC3 489 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 SYT11Q9BT88 431 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 SYTL2Q9HCH5 934 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 PCDH18Q9HCL0 1135 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 COPG1Q9Y678 874 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 CELSR1Q9NYQ6 3014 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 PDZD2O15018 2839 aa11.2□□□□□ -0.62
TRAPPC9-203ENST00000517667 POLEQ07864 2286 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 SETD2Q9BYW2 2564 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ARHGAP10A1A4S6 786 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 HEATR9A2RTY3 570 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 FTLP02792 175 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 HLA-DQB2P05538 268 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 RORAP35398 523 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 DMPKQ09013 629 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 RAPSNQ13702 412 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ATP1A4Q13733 1029 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 KYNUQ16719 465 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 PLEKHS1Q5SXH7 462 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ARMC6Q6NXE6 501 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 CERS6Q6ZMG9 384 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 IRF2BP2Q7Z5L9 587 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 C11orf96Q7Z7L8 435 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 OOSP2Q86WS3 158 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ZBTB2Q8N680 514 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 CLEC1AQ8NC01 280 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 EID2BQ96D98 161 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 FER1L6-AS2Q96M78 137 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 TTC25Q96NG3 672 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 TSGA13Q96PP4 275 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 RANBP9Q96S59 729 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ZCCHC2Q9C0B9 1178 aaKnown RBP11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 MAGEE1Q9HCI5 957 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 HRASLS2Q9NWW9 162 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 SOHLH2Q9NX45 425 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 DTLQ9NZJ0 730 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 TRIM10Q9UDY6 481 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 BTRCQ9Y297 605 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 F8P00451 2351 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
TRAPPC9-203ENST00000517667 C9J4A7 227 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 MTX2O75431 263 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 PRF1P14222 555 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 TCF4P15884 667 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 MX2P20592 715 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 GRNP28799 593 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 HADHAP40939 763 aa11.18□□□□□ -0.62
TRAPPC9-203ENST00000517667 CD86P42081 329 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms