RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 H0YCG3 227 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 UBE2Q2LH0YL09 131 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 TRIM77I1YAP6 450 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 INPPL1O15357 1258 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 MED24O75448 989 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 LINGO3P0C6S8 592 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 PRG2P13727 222 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 KLRC2P26717 231 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 SFNP31947 248 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 SERPINB6P35237 376 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 ARSEP51690 589 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 SOX10P56693 466 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 GBE1Q04446 702 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 GAMTQ14353 236 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 PTPRCAPQ14761 206 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 SYTL3Q4VX76 610 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 BOLA3Q53S33 107 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 PRAMEF8Q5VWM4 474 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 ARMCX2Q7L311 632 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 HAUS6Q7Z4H7 955 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 HACE1Q8IYU2 909 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 BANPQ8N9N5 519 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 CTNNBL1Q8WYA6 563 aaPredicted RBP5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 IGSF8Q969P0 613 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 BSCL2Q96G97 398 aaPredicted RBP5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 PRRX2Q99811 253 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 KCNK15Q9H427 330 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 NGBQ9NPG2 151 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 PRMT8Q9NR22 394 aaPredicted RBP5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 GRHL1Q9NZI5 618 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 VPS18Q9P253 973 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 LARSQ9P2J5 1176 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 IL17BQ9UHF5 180 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 KAT6AQ92794 2004 aa5.62□□□□□ -1.51
CTNNA1-202ENST00000517533 CTAGE9A4FU28 777 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 C2CD4BA6NLJ0 364 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 PPP6CO00743 305 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 RASGRF2O14827 1237 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ATP2A1O14983 1001 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TTI1O43156 1089 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 MSI1O43347 362 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TSC22D2O75157 780 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CREG1O75629 220 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 MT-ATP6P00846 226 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 C8orf89P0DMQ9 161 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CCDC192P0DO97 292 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 GZMAP12544 262 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ARF4P18085 180 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TACR3P29371 465 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 MDH1P40925 334 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 WNT5AP41221 380 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 GPR143P51810 404 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CCNA1P78396 465 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 BEX3Q00994 111 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SLC18A2Q05940 514 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 COX10Q12887 443 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CEBPEQ15744 281 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 FUT11Q495W5 492 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CCDC40Q4G0X9 1142 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 RNASEH2BQ5TBB1 312 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 BRAT1Q6PJG6 821 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ZNF782Q6ZMW2 699 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ZNF66Q6ZN08 573 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 RBM43Q6ZSC3 357 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TBC1D26Q86UD7 250 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TLK2Q86UE8 772 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CCDC83Q8IWF9 413 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 KDM8Q8N371 416 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ZCCHC9Q8N567 271 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 BRSK1Q8TDC3 778 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TMEM170AQ8WVE7 144 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 RRNAD1Q96FB5 475 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 EGLN2Q96KS0 407 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 ZNF560Q96MR9 790 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 FRG2BQ96QU4 278 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SIN3AQ96ST3 1273 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 OLFM1Q99784 485 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SEMA3CQ99985 751 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CCSER1Q9C0I3 900 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 HIPK3Q9H422 1215 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 EPB41L5Q9HCM4 733 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SPG21Q9NZD8 308 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 PLEKHB1Q9UF11 243 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SLC24A2Q9UI40 661 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 PTBP2Q9UKA9 531 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 SNX7Q9UNH6 387 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 NUDCQ9Y266 331 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 TNFSF13BQ9Y275 285 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 CARD8Q9Y2G2 431 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 WDR37Q9Y2I8 494 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 C2CD2Q9Y426 696 aa5.61□□□□□ -1.51
CTNNA1-202ENST00000517533 MST1RQ04912 1400 aa5.6□□□□□ -1.51
CTNNA1-202ENST00000517533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms