RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SPATA20Q8TB22 786 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 BICD2Q8TD16 824 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TMEM174Q8WUU8 243 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ADAMTS14Q8WXS8 1223 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NSMAFQ92636 917 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DNASE1L2Q92874 299 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 BSCL2Q96G97 398 aaPredicted RBP3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LRRC3BQ96PB8 259 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 OR6C1Q96RD1 312 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SIGLEC11Q96RL6 698 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PKP4Q99569 1192 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SH3GL2Q99962 352 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 C16orf70Q9BSU1 422 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FSD1Q9BTV5 496 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FNDC11Q9BVV2 318 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SPRY4Q9C004 299 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DPAGT1Q9H3H5 408 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TMEM206Q9H813 350 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MRPL44Q9H9J2 332 aaKnown RBP3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 OSER1Q9NX31 292 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FETUBQ9UGM5 382 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TINAGQ9UJW2 476 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PACSIN3Q9UKS6 424 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ITGA11Q9UKX5 1188 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SNX7Q9UNH6 387 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TMEM184BQ9Y519 407 aaPredicted RBP3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 RAI2Q9Y5P3 530 aa3.2□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ASTN2O75129 1339 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 KRT87PA6NCN2 255 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZNF814B7Z6K7 855 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 INO80B-WBP1J3KQ70 363 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CLDN4O14493 209 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PTGESO14684 152 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 HS3ST1O14792 307 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC30A4O14863 429 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ANKRD28O15084 1053 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MDM4O15151 490 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PGRMC2O15173 223 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SPINT2O43291 252 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 AP5Z1O43299 807 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TLX3O43711 291 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SELENOFO60613 162 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ATG13O75143 517 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 RTN2O75298 545 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PPFIA2O75334 1257 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NME6O75414 186 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 STAM2O75886 525 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DDNO94850 711 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MOCS3O95396 460 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 GCP02774 474 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PTMAP06454 111 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 RAB40ALP0C0E4 278 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DANCRP0C864 163 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 UROSP10746 265 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PCP11498 1178 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 GAP43P17677 238 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LBPP18428 481 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ITIH1P19827 911 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 EEF1B2P24534 225 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 HOXD9P28356 352 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 HPDP32754 393 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CASP3P42574 277 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NT5C2P49902 561 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LIMK1P53667 647 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 RAD23BP54727 409 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CLDN20P56880 219 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 UBASH3AP57075 661 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PROK1P58294 105 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 STX1BP61266 288 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ST8SIA6P61647 398 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 POLR2LP62875 67 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ID2Q02363 134 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ST3GAL1Q11201 340 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TROAPQ12815 778 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 NPRL3Q12980 569 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC39A14Q15043 492 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 INPP5JQ15735 1006 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DECR1Q16698 335 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PAPPA-AS1Q5QFB9 102 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 LCN10Q6JVE6 187 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 KCTD18Q6PI47 426 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 FAM198BQ6UWH4 519 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 OLFML1Q6UWY5 402 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 DEF8Q6ZN54 512 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 Q6ZSV7 163 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZNF534Q76KX8 674 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ATG9AQ7Z3C6 839 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CTU1Q7Z7A3 348 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ZC3HC1Q86WB0 502 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 CNGA4Q8IV77 575 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TIGD4Q8IY51 512 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 PM20D2Q8IYS1 436 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 MAML2Q8IZL2 1156 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 SLC38A9Q8NBW4 561 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ACVR1CQ8NER5 493 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 BBS10Q8TAM1 723 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 ST7LQ8TDW4 575 aa3.19□□□□□ -1.9
SCARNA15.2-201ENST00000516409 TAAR8Q969N4 342 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms