RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.22
USP46-209ENST00000514536 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.22
USP46-209ENST00000514536 OR2L2Q8NH16 312 aa13.71□□□□□ -0.22
USP46-209ENST00000514536 SNF8Q96H20 258 aa13.71□□□□□ -0.22
USP46-209ENST00000514536 PWWP2AQ96N64 755 aa13.71□□□□□ -0.22
USP46-209ENST00000514536 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.22
USP46-209ENST00000514536 CCM2Q9BSQ5 444 aa13.71□□□□□ -0.22
USP46-209ENST00000514536 MAP1BP46821 2468 aaKnown RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 KIR2DS5A0A0G2JLQ3 304 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 A0A0G2JNG1 304 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 GOLGA8KD6RF30 607 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 GOLGA8TH3BQL2 631 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 KIR2DS3K7RE56 304 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 B4GAT1O43505 415 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 BANF1O75531 89 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 AP2A2O94973 939 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 SEC31AO94979 1220 aaKnown RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 RPLP0P05388 317 aaKnown RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 POLBP06746 335 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 BRAFP15056 766 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ARNTP27540 789 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 PPARGP37231 505 aaPredicted RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 NSG1P42857 185 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 RPL21P46778 160 aaKnown RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 OR1D5P58170 312 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 DHX9Q08211 1270 aaKnown RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 DMPKQ09013 629 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 KIR2DS5Q14953 304 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ST3GAL2Q16842 350 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 BBS9Q3SYG4 887 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 CDCP2Q5VXM1 449 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ABRAXAS1Q6UWZ7 409 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 WASH2PQ6VEQ5 465 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 TMEM135Q86UB9 458 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 SLC9B2Q86UD5 537 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 CCNJLQ8IV13 435 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 CFAP206Q8IYR0 622 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 OTUD6BQ8N6M0 293 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ZNF669Q96BR6 464 aaPredicted RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 STAMBPL1Q96FJ0 436 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 LINC00615Q96LM1 132 aaPredicted RBP13.7□□□□□ -0.22
USP46-209ENST00000514536 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 DPH5Q9H2P9 285 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 LRRN3Q9H3W5 708 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 WASH6PQ9NQA3 447 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 PSMD13Q9UNM6 376 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 CLCA2Q9UQC9 943 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 WDR37Q9Y2I8 494 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 NEUROG3Q9Y4Z2 214 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 RPS6KL1Q9Y6S9 549 aa13.7□□□□□ -0.22
USP46-209ENST00000514536 ARHGEF17Q96PE2 2063 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 ZNF106Q9H2Y7 1883 aaKnown RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 A0A1W2PQM1 296 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 FAM221BA6H8Z2 402 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 SMAPO00193 183 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 PAMP19021 973 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 SLC19A1P41440 591 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 FASLGP48023 281 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 HHEXQ03014 270 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 TARDBPQ13148 414 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP46-209ENST00000514536 CLCA4Q14CN2 919 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 AMZ1Q400G9 498 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 KIAA0930Q6ICG6 404 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 PACS1Q6VY07 963 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 ZNF438Q7Z4V0 828 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 SPRED1Q7Z699 444 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 LILRA3Q8N6C8 439 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 KIF18AQ8NI77 898 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 SARS2Q9NP81 518 aaKnown RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 IL1RAPL1Q9NZN1 696 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
USP46-209ENST00000514536 CPNE7Q9UBL6 633 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
USP46-209ENST00000514536 ZCWPW2A0A1B0GU75 182 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 KLHL33A6NCF5 533 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 OR52A4PA6NMU1 304 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 NTN3O00634 580 aaPredicted RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 TP73O15350 636 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 NDUFS3O75489 264 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 USP1O94782 785 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 GPR3P46089 330 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 TTPAP49638 278 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 SPIDRQ14159 915 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 HP1BP3Q5SSJ5 553 aaPredicted RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 NEPROQ6NW34 567 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 SDCCAG8Q86SQ7 713 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms