RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SEMA4CQ9C0C4 833 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 FBXO8Q9NRD0 319 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 WDR70Q9NW82 654 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 IMPACTQ9P2X3 320 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 TRIM10Q9UDY6 481 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 KLHL3Q9UH77 587 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 FKBPLQ9UIM3 349 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 AMFRQ9UKV5 643 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 PACSIN2Q9UNF0 486 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 WDR37Q9Y2I8 494 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DNMT3AQ9Y6K1 912 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 SLC30A1Q9Y6M5 507 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 BSNQ9UPA5 3926 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 C5orf60A6NFR6 353 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 OR2AG2A6NM03 316 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 C2orf81A6NN90 581 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 AGAP14A8MT82 685 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 TOX3O15405 576 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 RAD1O60671 282 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 SRP72O76094 671 aaKnown RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 FTCDO95954 541 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 ITGB2P05107 769 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 HALP42357 657 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 XIAPP98170 497 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 PDE1BQ01064 536 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 LINC00303Q3SY05 128 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 KCTD11Q693B1 232 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 TMEM220Q6QAJ8 160 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 XKR5Q6UX68 686 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 CEACAM20Q6UY09 585 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 FAM83HQ6ZRV2 1179 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 PRSS42Q7Z5A4 293 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 AMZ2Q86W34 360 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 OR4K2Q8NGD2 314 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 GPR150Q8NGU9 434 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF398Q8TD17 642 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 JPH3Q8WXH2 748 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 RSC1A1Q92681 617 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 CXorf40BQ96DE9 158 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 HES6Q96HZ4 224 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF514Q96K75 400 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 CTRCQ99895 268 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 ZPBPQ9BS86 351 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 ARNT2Q9HBZ2 717 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 APMAPQ9HDC9 416 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 FEZ2Q9UHY8 353 aaPredicted RBP10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 PILRAQ9UKJ1 303 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 KCTD3Q9Y597 815 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 TENM4Q6N022 2769 aa10.26□□□□□ -0.77
HMGXB3-205ENST00000514469 KLHL33A6NCF5 533 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 SGTAO43765 313 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 POP7O75817 140 aaKnown RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 CRTAMO95727 393 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 DLGAP3O95886 979 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 TYRP1P17643 537 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 MSH3P20585 1137 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 AKT1P31749 480 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 LEPRP48357 1165 aaKnown RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 NFE2L1Q14494 772 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 RPE65Q16518 533 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 LONRF2Q1L5Z9 754 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 BCL7AQ4VC05 210 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 FNBP1LQ5T0N5 605 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 ARHGEF18Q6ZSZ5 1173 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 CACNA2D3Q8IZS8 1091 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 BEND7Q8N7W2 519 aaPredicted RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 ZSCAN1Q8NBB4 408 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 OR13C4Q8NGS5 318 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 MED8Q96G25 268 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 TGM7Q96PF1 710 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF768Q9H5H4 540 aaKnown RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 ASB8Q9H765 288 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 EPHA6Q9UF33 1036 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 R3HDM2Q9Y2K5 976 aaKnown RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 TMEM184BQ9Y519 407 aaPredicted RBP10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 BOD1L1Q8NFC6 3051 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 SDK2Q58EX2 2172 aa10.25□□□□□ -0.77
HMGXB3-205ENST00000514469 MGAT4DA6NG13 374 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 LDB2O43679 373 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 METTL18O95568 372 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 MTHFD1P11586 935 aaKnown RBP10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 PLA2G2AP14555 144 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 LIFP15018 202 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 AMD1P17707 334 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 PBLDP30039 288 aaPredicted RBP10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 HADHAP40939 763 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 GDF10P55107 478 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SPARCL1Q14515 664 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 PARP6Q2NL67 630 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 P3H1Q32P28 736 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 METRNLQ641Q3 311 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 DET1Q7L5Y6 550 aa10.24□□□□□ -0.77
HMGXB3-205ENST00000514469 SNX20Q7Z614 316 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms