RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 GLYATL1Q969I3 302 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 EID2BQ96D98 161 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 SPATA16Q9BXB7 569 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 TRIM7Q9C029 511 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 PCDH9Q9HC56 1237 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 AGPAT4Q9NRZ5 378 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 TAS2R14Q9NYV8 317 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 NFKBIL1Q9UBC1 381 aaPredicted RBP10.7□□□□□ -0.7
DDX41-216ENST00000513562 HIVEP1P15822 2718 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 SETD2Q9BYW2 2564 aaPredicted RBP10.69□□□□□ -0.7
DDX41-216ENST00000513562 UBA6A0AVT1 1052 aaPredicted RBP10.69□□□□□ -0.7
DDX41-216ENST00000513562 OR5K3A6NET4 321 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 MTX2O75431 263 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 ZBTB11O95625 1053 aaPredicted RBP10.69□□□□□ -0.7
DDX41-216ENST00000513562 IL1R2P27930 398 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 HALP42357 657 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 ABRQ12979 859 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 KYNUQ16719 465 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 QPCTQ16769 361 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 SMTNL2Q2TAL5 461 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 ALS2CLQ60I27 953 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 C11orf96Q7Z7L8 435 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 MRGPREQ86SM8 312 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 KCNMB4Q86W47 210 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 RAB43Q86YS6 212 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 SYTL1Q8IYJ3 562 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 CARFQ8N187 725 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.69□□□□□ -0.7
DDX41-216ENST00000513562 TRAM1L1Q8N609 369 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 TM9SF4Q92544 642 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 NUP85Q9BW27 656 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 ZNF552Q9H707 407 aaPredicted RBP10.69□□□□□ -0.7
DDX41-216ENST00000513562 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
DDX41-216ENST00000513562 PCMTD2Q9NV79 361 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 TRIM10Q9UDY6 481 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 AMACRQ9UHK6 382 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 OSGIN2Q9Y236 505 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 BTRCQ9Y297 605 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 PCSK5Q92824 1860 aa10.69□□□□□ -0.7
DDX41-216ENST00000513562 CROCCQ5TZA2 2017 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 ANKRD66B4E2M5 251 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 KLHL41O60662 606 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 IPO13O94829 963 aaKnown RBP10.68□□□□□ -0.7
DDX41-216ENST00000513562 CDK14O94921 469 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 VCLP18206 1134 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 CA5AP35218 305 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 PTGER4P35408 488 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 PCK1P35558 622 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 GLRBP48167 497 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 NIPAL4Q0D2K0 466 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 PLCL1Q15111 1095 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 LLGL1Q15334 1064 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 RPE65Q16518 533 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 KHDC1Q4VXA5 237 aaKnown RBP10.68□□□□□ -0.7
DDX41-216ENST00000513562 ZNF789Q5FWF6 425 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 DCAF10Q5QP82 559 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 TMTC4Q5T4D3 741 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 PPP1R2P3Q6NXS1 205 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 GDF7Q7Z4P5 450 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 GALNT16Q8N428 558 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 CLEC1AQ8NC01 280 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 GPR26Q8NDV2 337 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 LURAP1Q96LR2 239 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 IP6K3Q96PC2 410 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 ZFYVE1Q9HBF4 777 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 TTLL3Q9Y4R7 772 aa10.68□□□□□ -0.7
DDX41-216ENST00000513562 MATN3O15232 486 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 KLF7O75840 302 aaPredicted RBP10.67□□□□□ -0.7
DDX41-216ENST00000513562 STSP08842 583 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 EDN3P14138 238 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 TCF4P15884 667 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 OTX2P32243 289 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 HADHAP40939 763 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 ZNF165P49910 485 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 SOX8P57073 446 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 DMPKQ09013 629 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 GALNT2Q10471 571 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 KRT31Q15323 416 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 ANO6Q4KMQ2 910 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 BOLA3Q53S33 107 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 FKBP15Q5T1M5 1219 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 HGSNATQ68CP4 663 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 SPOCD1Q6ZMY3 1216 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 OOSP2Q86WS3 158 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 TRAPPC5Q8IUR0 188 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 ZADH2Q8N4Q0 377 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 HSPH1Q92598 858 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 FATE1Q969F0 183 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 DPH2Q9BQC3 489 aaPredicted RBP10.67□□□□□ -0.7
DDX41-216ENST00000513562 DHRS4Q9BTZ2 278 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 TLR10Q9BXR5 811 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 ACTR5Q9H9F9 607 aaPredicted RBP10.67□□□□□ -0.7
DDX41-216ENST00000513562 FANCEQ9HB96 536 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 ZBTB20Q9HC78 741 aaPredicted RBP10.67□□□□□ -0.7
DDX41-216ENST00000513562 PCDH18Q9HCL0 1135 aa10.67□□□□□ -0.7
DDX41-216ENST00000513562 RAD18Q9NS91 495 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms