RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 ISCUQ9H1K1 167 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 PIGMQ9H3S5 423 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 PPP1R3EQ9H7J1 279 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 EPB41L5Q9HCM4 733 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 KRCC1Q9NPI7 259 aaPredicted RBP4.03□□□□□ -1.76
GYPB-214ENST00000513557 ACSS1Q9NUB1 689 aaPredicted RBP4.03□□□□□ -1.76
GYPB-214ENST00000513557 PDRG1Q9NUG6 133 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 PAG1Q9NWQ8 432 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 TRNAU1APQ9NX07 287 aaKnown RBP4.03□□□□□ -1.76
GYPB-214ENST00000513557 MTMR10Q9NXD2 777 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 HEY2Q9UBP5 337 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 UBA2Q9UBT2 640 aaPredicted RBP4.03□□□□□ -1.76
GYPB-214ENST00000513557 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 CCL27Q9Y4X3 112 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 KIAA1210Q9ULL0 1709 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 LMO7Q8WWI1 1683 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 DISP2A7MBM2 1401 aa4.03□□□□□ -1.76
GYPB-214ENST00000513557 LRRC37A3O60309 1634 aa4.03□□□□□ -1.77
GYPB-214ENST00000513557 BRD4O60885 1362 aaPredicted RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 SLIT3O75094 1523 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 NUP188Q5SRE5 1749 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 LOC102723996A0A087X1L8 192 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 LNP1A1A4G5 178 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 A8MXE2 369 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 MS4A18H0YCH9 400 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 WNT9BO14905 357 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 SMAD9O15198 467 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 WDR46O15213 610 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 SLC7A4O43246 635 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 PSMD10O75832 226 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 EPN2O95208 641 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 GOSR1O95249 250 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 GGPS1O95749 300 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 MT-ND3P03897 115 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ATP5BP06576 529 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 MYBL1P10243 752 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ARSBP15848 533 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 MAOAP21397 527 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 ENTPD1P49961 510 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ECT2LQ008S8 904 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 CXCL9Q07325 125 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 SRSF4Q08170 494 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 GRSF1Q12849 480 aaKnown RBP eCLIP4.02□□□□□ -1.77
GYPB-214ENST00000513557 SNTB1Q13884 538 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 PTGR1Q14914 329 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 RBMS2Q15434 407 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 DLG2Q15700 870 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 SRSF7Q16629 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
GYPB-214ENST00000513557 EIF2S3LQ2VIR3 472 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 KRT80Q6KB66 452 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 PLPPR4Q7Z2D5 763 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 METTL23Q86XA0 190 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 CEP97Q8IW35 865 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 DSELQ8IZU8 1212 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 MMP21Q8N119 569 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 TMEM199Q8N511 208 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ARFGAP1Q8N6T3 406 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 MIGA1Q8NAN2 632 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ZBTB8BQ8NAP8 495 aaPredicted RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 C7orf57Q8NEG2 295 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 C16orf52Q8NHV5 167 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 PTPMT1Q8WUK0 201 aaPredicted RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 PTERQ96BW5 349 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ZG16BQ96DA0 208 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 SH3GL2Q99962 352 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 DNAI2Q9GZS0 605 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 DNAJC18Q9H819 358 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 CLK4Q9HAZ1 481 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 PFDN4Q9NQP4 134 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 SLC9A2Q9UBY0 812 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 OR14J1Q9UGF5 321 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ANAPC2Q9UJX6 822 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 TTC7AQ9ULT0 858 aaPredicted RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 AGTPBP1Q9UPW5 1226 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 ZNF148Q9UQR1 794 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 HS3ST3B1Q9Y662 390 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 TNS2Q63HR2 1409 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 EDC4Q6P2E9 1401 aaKnown RBP4.02□□□□□ -1.77
GYPB-214ENST00000513557 LRP5O75197 1615 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 USP47Q96K76 1375 aa4.02□□□□□ -1.77
GYPB-214ENST00000513557 GPR75-ASB3A0A0A6YYF3 556 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 KANSL1LA0AUZ9 987 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 CPED1A4D0V7 1026 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 I6L893 689 aaPredicted RBP4.01□□□□□ -1.77
GYPB-214ENST00000513557 MAP2K7O14733 419 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 ZIC3O60481 467 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 B3GALNT1O75752 331 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 FGBP02675 491 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 CYP1A2P05177 515 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 ICAM1P05362 532 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 TCF7P36402 384 aaPredicted RBP4.01□□□□□ -1.77
GYPB-214ENST00000513557 MATR3P43243 847 aaKnown RBP eCLIP4.01□□□□□ -1.77
GYPB-214ENST00000513557 MMP13P45452 471 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 ME1P48163 572 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 SRSF1Q07955 248 aaKnown RBP eCLIP4.01□□□□□ -1.77
GYPB-214ENST00000513557 SREBF2Q12772 1141 aa4.01□□□□□ -1.77
GYPB-214ENST00000513557 GRIK2Q13002 908 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms