RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 HCAR3P49019 387 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 SOX8P57073 446 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 TUBB4BP68371 445 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 HSD11B2P80365 405 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 TUBB2AQ13885 445 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 KHDC1Q4VXA5 237 aaKnown RBP10.93□□□□□ -0.66
RNF4-218ENST00000513284 DCAF10Q5QP82 559 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 AGAP9Q5VTM2 703 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 DUS1LQ6P1R4 473 aaKnown RBP10.93□□□□□ -0.66
RNF4-218ENST00000513284 CYB5D1Q6P9G0 228 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 CRTC3Q6UUV7 619 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 C11orf96Q7Z7L8 435 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 KMT5CQ86Y97 462 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 GALNT16Q8N428 558 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 TEX26Q8N6G2 289 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 GPR150Q8NGU9 434 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 FAR1Q8WVX9 515 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 LYSMD1Q96S90 227 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 TUBB2BQ9BVA1 445 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 LATS2Q9NRM7 1088 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 ANO10Q9NW15 660 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 PCSK1NQ9UHG2 260 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 TMPRSS11EQ9UL52 423 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 FER1L5A0AVI2 2057 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 A0A1B0GUH1 482 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 PDZK1P1A8MUH7 402 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 EPHB6O15197 1021 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 FERP16591 822 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 AMPD1P23109 780 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 MMP13P45452 471 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 KLK7P49862 253 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 ZNF135P52742 658 aaPredicted RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 GSDMDP57764 484 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 FOXL2P58012 376 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 UBXN1Q04323 297 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 HIF1AQ16665 826 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 ZNF630Q2M218 657 aaPredicted RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 PTCHD3Q3KNS1 767 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 TDRD12Q587J7 1177 aaKnown RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 PPP6R3Q5H9R7 873 aaPredicted RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 MARC1Q5VT66 337 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 ZNF385CQ66K41 422 aaPredicted RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 MRGPREQ86SM8 312 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 RBM12BQ8IXT5 1001 aaKnown RBP10.92□□□□□ -0.66
RNF4-218ENST00000513284 ZADH2Q8N4Q0 377 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
RNF4-218ENST00000513284 CCDC78A2IDD5 438 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 LGALS16A8MUM7 142 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 KMOO15229 486 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 MTX2O75431 263 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 RNF8O76064 485 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 SLC25A14O95258 325 aaPredicted RBP10.91□□□□□ -0.66
RNF4-218ENST00000513284 BPIP17213 487 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 HTR1EP28566 365 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 OTX2P32243 289 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 MYL5Q02045 173 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 DSC2Q02487 901 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 NIPAL4Q0D2K0 466 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 NCF4Q15080 339 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 INSCQ1MX18 579 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 ACAD10Q6JQN1 1059 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 SYTL1Q8IYJ3 562 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 NDUFAF2Q8N183 169 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNF4-218ENST00000513284 GPR26Q8NDV2 337 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 OR1L3Q8NH93 324 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 ARRDC2Q8TBH0 407 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 CXorf40BQ96DE9 158 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 GBP4Q96PP9 640 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 SLX1AQ9BQ83 275 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 TIMM29Q9BSF4 260 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 TRIM7Q9C029 511 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 FANCLQ9NW38 375 aa10.91□□□□□ -0.66
RNF4-218ENST00000513284 NOVA2Q9UNW9 492 aaKnown RBP10.91□□□□□ -0.66
RNF4-218ENST00000513284 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
RNF4-218ENST00000513284 C1orf232A0A0U1RR37 186 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 A0A1W2PQJ5 194 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 RGSL1A5PLK6 1076 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 TLCD2A6NGC4 264 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 CNOT3O75175 753 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 ZBTB11O95625 1053 aaPredicted RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 IDSP22304 550 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 PSMA2P25787 234 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 MIPP30301 263 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 ARL4DP49703 201 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 KPNA2P52292 529 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 SSPNQ14714 243 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 RPE65Q16518 533 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 STX1AQ16623 288 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 QPCTQ16769 361 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 DNTTIP2Q5QJE6 756 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 ZNF324BQ6AW86 544 aaPredicted RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 ALG1LQ6GMV1 187 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 IGFL2Q6UWQ7 119 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 RBM43Q6ZSC3 357 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 LRRTM4Q86VH4 590 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms