RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TMCO3Q6UWJ1 677 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 SLC36A4Q6YBV0 504 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 C15orf52Q6ZUT6 534 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 ATG9AQ7Z3C6 839 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 DZIP1Q86YF9 867 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 EPHX4Q8IUS5 362 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 RNF168Q8IYW5 571 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 SPATA6LQ8N4H0 392 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 APPL2Q8NEU8 664 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 OR8K5Q8NH50 307 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 ASB5Q8WWX0 329 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 SNAPC3Q92966 411 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 PERPQ96FX8 193 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 TEX12Q9BXU0 123 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 TKTL2Q9H0I9 626 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CHMP4BQ9H444 224 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 CLK4Q9HAZ1 481 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 SCPEP1Q9HB40 452 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CHORDC1Q9UHD1 332 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 RPS6KA6Q9UK32 745 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 TTLL3Q9Y4R7 772 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 SBF1O95248 1867 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CCDC88AQ3V6T2 1871 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 WDR90Q96KV7 1748 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 SRCAPQ6ZRS2 3230 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 FAM205AQ6ZU69 1335 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 TAF1P21675 1872 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 FER1L6Q2WGJ9 1857 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 A0A1B0GUL7 405 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PRSS47A8MTI9 375 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 INAFM1C9JVW0 142 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 I6L893 689 aaPredicted RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 HSPA12AO43301 675 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 GLUD1P00367 558 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 UQCRFS1P1P0C7P4 283 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 HSPA8P11142 646 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 UBA1P22314 1058 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 ACTN2P35609 894 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 HADHAP40939 763 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 GLUD2P49448 558 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 MFAP4P55083 255 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 FKBP1AP62942 108 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 FKBP1BP68106 108 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 CSNK2A1P68400 391 aaPredicted RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 GSTO1P78417 241 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 NUCB1Q02818 461 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 EPS8Q12929 822 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 GRIK2Q13002 908 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 TNFAIP1Q13829 316 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 CALCRLQ16602 461 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PNLIPRP3Q17RR3 467 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 SGO1Q5FBB7 561 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 COLEC12Q5KU26 742 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 DCST1Q5T197 706 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PQLC2Q6ZP29 291 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 SZRD1Q7Z422 152 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 CCDC190Q86UF4 302 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 ARID3BQ8IVW6 561 aaPredicted RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 ADHFE1Q8IWW8 467 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 AADATQ8N5Z0 425 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 CSNK2A3Q8NEV1 391 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PPP4R1Q8TF05 950 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 IGFBPL1Q8WX77 278 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 WASF1Q92558 559 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 SLC25A33Q9BSK2 321 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 C1QTNF7Q9BXJ2 289 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 TMEM39BQ9GZU3 492 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PLK3Q9H4B4 646 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 PPP1R3EQ9H7J1 279 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 C17orf75Q9HAS0 396 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 RNF186Q9NXI6 227 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 MRPL15Q9P015 296 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 CPSF2Q9P2I0 782 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 OR14J1Q9UGF5 321 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 FBXW11Q9UKB1 542 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 NENFQ9UMX5 172 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 STON1Q9Y6Q2 735 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 DLEC1Q9Y238 1755 aa4.22□□□□□ -1.73
HTT-210ENST00000512909 BRCA1P38398 1863 aaKnown RBP4.22□□□□□ -1.73
HTT-210ENST00000512909 ZBED9Q6R2W3 1325 aa4.21□□□□□ -1.73
HTT-210ENST00000512909 SNED1Q8TER0 1413 aa4.21□□□□□ -1.73
HTT-210ENST00000512909 TIAM2Q8IVF5 1701 aa4.21□□□□□ -1.73
HTT-210ENST00000512909 KANSL1LA0AUZ9 987 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 C1orf226A1L170 272 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 FRMD3A2A2Y4 597 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 LINC01553A4QN01 128 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 A8MV72 311 aaPredicted RBP4.21□□□□□ -1.74
HTT-210ENST00000512909 BTBD18B2RXH4 712 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 OVOL3O00110 214 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 CTDSP2O14595 271 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 TIMM23O14925 209 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 OGG1O15527 345 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 HMMRO75330 724 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 DAB1O75553 588 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 EGFP01133 1207 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 LCATP04180 440 aa4.21□□□□□ -1.74
HTT-210ENST00000512909 T-ENOLP0DO92 83 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms